Salinispora arenicola: Sare_1496
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Entry
Sare_1496 CDS
T00613
Name
(GenBank) SMC domain protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
saq
Salinispora arenicola
Brite
KEGG Orthology (KO) [BR:
saq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
saq03400
]
Sare_1496
DNA repair and recombination proteins [BR:
saq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Sare_1496
Archaeal homologous recombinant proteins
Sare_1496
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
SbcC_Walker_B
AAA_29
ABC_tran
AAA_21
AAA_27
AAA_15
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ABV97394
UniProt:
A8LUP1
LinkDB
All DBs
Position
complement(1721457..1723931)
Genome browser
AA seq
824 aa
AA seq
DB search
MRPMRLDLAGFTVFRAPTTIDFTDADFFALVGPTGSGKSTVLDAICFALYGTVPRWGGTR
GLANALAPSATEARVRLVFESAGDRYVVTRVVRRDSRGNVKTAGAGLQLMPPGFDPSKLD
TGLSPDDLGEVLAGTAAEMDGAVRAAVGLPYEQFTSCVLLPQGQFADFLHARPATRQQIL
VNLLGLGVYEQVREKAANRAGQAEAKFEVVDQALAGLTDIDDATLDDVSARVDRMRELAT
AVTAAVPERDAARTAAREAGAALAALDADLTVLDAVRAPAGVAEVARAVATARTDADEAT
TAVGLAEEREEKLRGELAAAGDESALRLLLRAYDDRAGLTGEAETARATVTAAQAGHAAA
AAKLAQAQAAAELAEADLAAAFRAHEQAKATDQAVALRVPLQDGATCPVCEQTVTRVPAV
PTDSAVPAAVAAGKAARAASDAAKAAVDARDSAARDRERELVAARLRQEQLDARMAALHA
QLADAAEPEELHRALAEHGRLRQELTESAAAVRAGREAARRARAAVDAAQERLRTAWRSF
DATRDGLARLGPPVTDREDLAAAWAALTDWATAEVARQRAERADRVAAVTAAEAQVTAVE
ERVGGLLEAAGVPATDDPVRAAAVALERAEAELRELTRRREQAGELREQRATYEREAQVA
RALAGHLRANNFERWLLAEALDLLVDGASTILRELSGDQYDLVHDKGEFFVVDHHDAGLR
RGVRTLSGGETFQASLALALALAEQLAGMSTTAASLESIVLDEGFGTLDTATLDTVAATL
ENLAARGDRMVGVVTHVPALAERIPVRFEVRKDAQSARVERTGR
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atgcggccgatgcgactggatctcgccgggttcaccgtgttccgcgcgccgacgaccatc
gacttcaccgacgccgacttcttcgcgctggtcgggccgaccgggtcgggcaagtccacg
gtgctcgatgccatctgtttcgcgctctacggcaccgtgccccggtggggcggcacccgt
ggattggccaacgccctcgccccgtcggcgaccgaggcgcgggtccggctggtcttcgag
tccgcgggcgaccgctacgtggtcacccgggtggtccgccgggacagccgcggcaacgtc
aagaccgccggcgccggcctgcagctcatgccgcccggtttcgatccgtcgaagctcgac
accggcctgagcccggacgacctgggcgaggtgctcgcgggcacggccgccgagatggac
ggtgcggtccgggccgcggtcgggctgccgtacgaacagttcaccagctgtgtgctgcta
ccacaggggcagttcgccgacttcctgcacgcccggccggcgacccggcagcagatcctg
gtcaacctgctcggtctcggtgtctacgagcaggtgcgggagaaggcggcgaaccgggcc
ggtcaggccgaggcgaagttcgaggtggtcgaccaggccctcgccggcctcaccgacatc
gacgacgccaccctcgacgacgtgtcggcccgggtcgaccggatgcgggagctggccacc
gccgtcaccgccgccgttcccgaacgggacgcggcgcgtaccgccgcgcgggaggccggc
gcggcgctggccgccctcgacgccgacctgaccgtactcgatgcggtgcgcgccccggcc
ggcgtggcggaggtcgcccgggcggtggcgaccgcgcggacggacgcggatgaggccact
accgcggtggggctggccgaggagcgggaggagaagctccgcggcgagctggccgcagcc
ggcgacgagagtgcgctgcgcctgctgctgcgggcgtacgacgaccgggcggggctgacc
ggcgaggccgagacggcccgggcgacggtcacggcggcccaggccgggcacgcggcggcg
gcggccaagctggcgcaggcgcaggcggcggccgagctggccgaggcggacctggccgcg
gcgttccgggcgcacgaacaggccaaggcgaccgaccaggcggtggcgctgcgggtgccg
ctgcaggacggtgctacctgcccggtctgtgagcagaccgtcacccgggtgccggcggtg
ccgacggattcggcggtgccggcagcggtcgcggccgggaaggcggcgcgggcggccagt
gacgcggccaaggccgcggtggacgcgcgggacagcgccgcgcgggatcgggaacgggag
ctggtggcggcgcggctccggcaggaacagctcgacgcgcgcatggccgcgttgcacgcc
cagctggccgacgccgccgagccggaggagctacaccgggcgttggccgaacacggacgg
ctgcgtcaggagctgacggagtcggcggcggcggtgcgcgccggccgggaagcggcccgc
cgggcgcgagccgcggtggacgccgcacaggagcggctgcgcacggcctggcgctcgttc
gacgcgacccgagacggtctggcccgactcggcccgccggtcaccgatcgggaggacctg
gcggcggcctgggccgcgctcaccgactgggcgacggccgaggtggcccggcagcgagcc
gagcgagccgaccgggtagcggcggtgacggcggccgaggcacaggtgaccgcggtcgag
gaacgggtcggtgggctgctggaggcggccggggtaccggccaccgacgacccggtccgc
gccgccgcagtcgccctcgaacgggccgaggcggagctgcgggagctgacccgccgccgg
gagcaggccggtgagctgcgcgagcagcgcgccacctacgagcgtgaggcgcaggtggcc
cgggcgctcgccgggcacctgcgcgccaacaacttcgaacgatggctgctcgccgaggcg
cttgacctcctggtggacggtgcgtcgacgatcctgcgggagctctccggcgaccagtac
gacctggtgcacgacaagggggagttcttcgtggtggaccaccacgacgccggtctgcgc
cggggggtgcgcacgttgtccggcggggagaccttccaggcgtcgctggcgctcgcgctg
gcgctggccgagcagcttgccgggatgtcgaccaccgcggccagcctggagtccatcgtg
ctcgacgaggggttcggcacgctcgacacggccaccctcgacacggtggcggccacgttg
gagaaccttgccgcccggggggaccggatggtgggcgtggtcacccacgtaccggcgctc
gccgagcgcataccggtccgattcgaggtccgcaaggacgcccagtcggcccgcgtcgaa
cggaccggccgatga
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