Salinispora arenicola: Sare_1834
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Entry
Sare_1834 CDS
T00613
Name
(GenBank) YD repeat protein
Organism
saq
Salinispora arenicola
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
DUF6531
Motif
Other DBs
NCBI-ProteinID:
ABV97720
UniProt:
A8LY03
LinkDB
All DBs
Position
2114005..2120121
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AA seq
2038 aa
AA seq
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MICGLAAVMVATISEVPRQPVEAAPPPPVDEVLERPDQMAALITARMTGKQVRITGMTTE
SAEYVAHPNGQIESKVYAGQVRMRQDDKWVEIDLTLQPAADGSVRAKAHPLDLWISGARK
ENGDLAAVGTGDRRLVLGWPGKLPTPVLSENRATYPEVAAGIDLVVEATRTGFSQYLTLK
SRAAVEHLPALDLPLSGKALSSFTQGTAGELTLKDAADKPVAVVPAPEMWDARREEGTER
PLRRALVKARSERRQPERGARANGLVMRLAPDLGWLKHPATKYPVTIDPQINALYTSFDT
YVKEGDSVDRSGANDIQLGLLATTPAVKARGFVHWPVSALAGKQITAATVYFWNWWSHSC
TASSWEIWTTGAASSATRWGTQPTWIQKEATSTETKGYSTACDDGWVSIDGASFFQRAAN
AGQATAYMGVRGTDESSTNSFKQFRSRNASSSSQVPYATVIYNSYPTVAMRSTVPATSCV
TGSSRPTVNTATPQLRSVITDAEASSTTAEFEWWTLNGSTKLGSMVTSTAASGSTFSAAV
PPGALHHDNSYKWRVRGNDGIVNGSWSSFCEFTVDTSIGSPPVVTSTTYPENAWGGDAGV
GGEFTFEANGVTDAAAYEYSLDVQPPNKVVNTSEPGGSATVTITPSTPGWHTVWVRTRDS
AGNVTELRNYPFKVGSAALTSPKIGDITGAKTVLSSIGTQSFTEVTYQWRRASSDSWVAI
PSSDVTYAVGGDPVAWPVPATGGTVPNLNWDVAATLAAVDSEGIPRDGPLQVRAYFNPNS
HGAPSDRVKIRFDRDRASADVADVGPGSVNLITGNYQLSTSDVSVVGLSVARTLNSRQPS
GNADPLFGPGWTSGIVVSDAQATYTRLTAYGSLVQVKLPDNSTIGFTEANAAGVNYEPQV
GAESYTLTFAASTNTFTLSDGDGNVVTFTRTATDPPNTYTPTAATVPGSGAATTYSWEKV
TLGAREVMRPTRLLAPVPDGITCTTLVRGCRALTFTYATATTATGTADGTWGDYADRVKE
ISYTAWDPDLQTPAMRTIALARYTYDSTGRLRAHSDPRLDYEDNGSTKQLRTVYYYNGDG
IITSLTPPAQEPWQFSYTTVPNDPGKGRLHKVTRSALSAGTAVETVVYQVPTSETGAPYD
LSAAEAERWGQSEPPTDATAVFPPTQVPNGNPAIGDLPSSYERATVTYLDANARQVNLAD
PGGHVSATWYDHWGNIVRTLTAGNRARALGASSTDDATAEATKAHRHSTLHLHSADGQRL
VSMLEPEHEVMLPTGGTARGRRTTSYTYDEDAPAAEEPYNLVTRQKVAVRLQDGSGAESE
IDVRTTTISYDWGLRQPTTVTVDPDGLAHTTRTAFDPDTGLVTSTTDPAGGTSETTPATQ
KTIYYRAGSGSGYSECDLKPEWADLPCRTQPGGQPAAGPELPVTVTTYDMLDQPRVVTEK
TSAGTLRTTTTKYDKAGRAYEKSVTAGPGLGTPVPVQREVYALDTGAHSRTQSVVNGSVV
TEVVRLFDTLGRITSYTDADNNASVFSYDVVGRVVSSHDGKAQRTYSYDEDTERRGLLTS
VDDTQAGRFSSTYDADGNTTSEVWPNGVTVNIEFNEIGDRVGLVYDKPNCSSEDCVLYTE
SAVRSVHGQRLVGISSFSQQRFEYDQAGRLAVVEDMVGGQCATRRYELSASSNWNSLAEY
GSSPDGSCHRGAALTTRTWAHDTADRVTNTGYDYDLLGRTISLPGVDTANPAGGDVTFTY
HATDLVDTITQNGRTTDYTLDVTGERIRSWTEYVNGTAEQRIHHYSGDQDSPSWTQETAT
RFTRPVSSVTGLAAIFDSGDTLDWQISNLHGDLVAGIKHGDDGASWTSESTEYGLPRNTA
SVKRYHWLGSAQRAADAPAGIMLMGVRLYNPTTGRFLQVDPVYGGSCNRYEYTCADPINQ
TDLSGKALPGVVAVLVALARGAYYACRISKSWCKRALKYLVTRAGRYLWRAYWWAVGKAK
VYSSNERVKRGLDCGRALYTAVSNVRYGGYRSKAIAFTAGFVFGAVTRWRCFPRGKYS
NT seq
6117 nt
NT seq
+upstream
nt +downstream
nt
atgatttgtggtttggcggcggtgatggttgcgaccatctccgaagtgcctcgtcaaccg
gttgaggcggcgccgcccccaccggttgacgaggtgctggagcggcctgatcagatggcc
gcccttatcaccgcccggatgaccggaaaacaggtccggattaccgggatgacgacggag
tccgccgagtacgtcgcccatccgaatgggcaaattgaatccaaggtgtacgccggacaa
gttcggatgcggcaggatgacaagtgggtggagatcgacctcacactacagccggcggct
gacgggtcggtacgggcgaaggcacacccgctcgatctttggatctccggggcgcgtaag
gagaacggtgacctggcggcggtgggtacaggcgacagacgtctggtcctcggctggccg
gggaagctgcccacgccggtgctgtcggagaaccgggctacctacccggaggtggcggcc
ggtatcgacctggtggtggaggccacccggacgggtttctcacagtacttgaccctcaag
agtcgcgcggctgtggagcatctgccggccctcgaccttcccttgagcggcaaggcgctt
tcctcgttcacccagggaaccgccggggaactgaccctgaaggacgccgcggacaaacca
gtggcggtggttccggcgccggagatgtgggatgcccgtcgagaggaggggactgagcgg
ccgttgcgtcgggcgctggtcaaggctcgttcggagcggaggcaaccggagcgaggtgcg
cgtgctaacggtctggtgatgcgtcttgcacccgacctgggctggttaaagcatccggct
acgaaatatccggtgacgatagacccgcagatcaatgctttgtatacgtcctttgacaca
tacgtgaaggagggcgacagcgtagaccgtagcggggcgaatgatattcaactcggcttg
ctggccactactccggcggtcaaggcgcggggtttcgtgcactggccagtatcagccttg
gccggcaagcagatcaccgcagcgacggtgtatttctggaactggtggtcgcacagctgt
accgccagctcgtgggagatctggaccaccggagctgcctcgtctgccaccaggtggggt
acacagccgacctggatccagaaggaggcgacatctaccgagaccaagggctactccaca
gcgtgtgacgacggctgggtcagcatcgatggcgcgagttttttccagcgggccgccaat
gctgggcaggcgacggcatacatgggtgtgcgggggaccgacgagtcgtcgacgaacagc
ttcaagcagttccgttcgcgcaatgcgtccagctcgagccaagtaccctacgcgactgta
atctacaattcatatccgactgttgccatgcgctcaacggtacctgccacgtcctgtgtg
accggatcgtctcggccgaccgtcaatacggccacgccgcaactgcggtcagtcatcacg
gacgccgaggcgtcctcgacgacggctgagttcgagtggtggacgcttaatggctccacc
aagctgggtagtatggtcacctcgactgccgcgtctgggtcgaccttcagtgccgccgtg
cctccaggggcattgcaccacgataactcctataagtggcgagtccgcggtaatgacggg
atcgtcaacggtagctggtcgtcattctgtgaattcaccgtggacacatcgatcggtagc
ccaccggttgtcacctccaccacctacccagagaacgcctggggtggggacgctggggtt
ggtggagagttcaccttcgaagcgaacggtgtaactgacgcagccgcctacgagtacagc
ttggacgttcaacccccgaacaaggtcgtgaacacgagcgaacctgggggttcggccacg
gtcaccatcactccgtcgacccctggatggcatacggtgtgggtgcgtaccagagattcc
gcaggcaacgtgaccgagctgcgtaattatccattcaaggtcggttctgcagcactgacc
tcccccaagataggtgacatcaccggagcgaagaccgttctgagctccattgggactcag
tcgttcaccgaggtcacctaccagtggcgtcgggccagctccgacagttgggtcgcgatc
ccgtcgtccgacgtcacctacgccgtcggtggcgatccggttgcgtggccggtaccggcg
acaggcggcaccgttccgaacctgaattgggatgtcgccgccaccctcgctgccgtcgac
tcggagggaattcctcgtgatgggcccttgcaggtccgggcctacttcaacccgaacagc
cacggcgcaccgagtgacagggtgaagatacgcttcgaccgtgaccgagcctccgccgac
gtcgccgacgtcggccccggatccgtcaatctgatcaccggcaactaccaactaagtacc
tccgatgtctcggttgttggactgtccgtggcgcggaccctgaacagccgtcagccgtcc
ggcaacgccgatccgctgttcggacccggctggacctccggcatcgtggtctcggacgca
caggccacctacactcggctgaccgcctatggaagcctggtccaggtcaagcttcccgac
aattcgacgatcggcttcaccgaagccaacgccgctggcgtgaactacgagccgcaggtc
ggcgccgagtcctacacgctgacctttgccgctagcaccaacactttcaccctgtccgac
ggtgatggaaacgtcgtcaccttcacccgcaccgcgaccgacccaccgaacacatacaca
ccgacagcggccactgtccccggatccggcgccgccaccacctactcctgggaaaaggtc
accctcggtgccagggaggtgatgcggccgactcgcttgctggcacccgttcccgacggg
atcacctgcacgaccctggtccgcggctgccgggccctgacctttacctacgctaccgcc
accacagccaccggcactgccgacggcacttggggtgactatgccgatcgagtcaaagag
atctcatacacggcttgggatccggacctgcagaccccggcgatgcggaccatcgccctc
gcccgctacacctatgacagcacaggccggctgcgcgcccactccgacccacgacttgac
tacgaagacaacggcagcactaagcaactgcgcaccgtctactactacaacggcgacggc
atcatcacgtccctgacaccgccggcgcaggagccctggcagttctcctacaccaccgtc
cccaacgacccaggcaagggccgccttcacaaggtgacccgttctgcgctctccgccggc
acagcagtggaaacagtcgtctaccaggtcccgacctcagaaactggcgcaccctacgac
ctctccgccgcagaagccgaacgctggggccagtccgaaccgcccaccgacgccaccgcg
gttttccctccaactcaggttccgaacggcaacccggccattggcgacctgccctcgtcg
tatgagcgggctacagtcacctacctggacgctaacgctcgccaggtcaatctagccgac
ccgggtggacacgtgagtgcaacatggtatgaccattggggcaacatcgtccggacgctt
accgctgggaatcgggctcgggcactgggtgccagttccacggacgatgcgacggcggag
gcaacgaaagcacacaggcactccactctccaccttcattcggccgatgggcagcgcctt
gtctcaatgctggagccagagcatgaggtcatgctaccgacgggtggcactgcgcgcggg
cgtagaaccacgagctacacctacgatgaggacgctcccgcggccgaggagccgtacaac
ctggtgacacgccaaaaggtggcagtccgactgcaggatggcagcggtgccgagtccgag
attgatgtgcgtactaccacgatcagctacgactggggcttgcgtcagcccaccacggtg
accgtggatccggacgggctagcccatacgacgcgaacagcgttcgacccggatactgga
ttggtaacgtcgaccactgatccggcaggcggaactagtgaaacgactccagctacgcag
aagaccatctactaccgcgccggttctgggtcgggctacagcgagtgcgacctaaagcct
gagtgggctgacttgccgtgccggacgcaaccgggtggccagccggccgccggccccgag
ttgccagtcaccgtgactacgtacgacatgctggatcaacccagagtggtgaccgaaaag
accagcgccgggacgctgcgtacgacaacgacaaagtacgacaaggccggtcgagcgtac
gagaagtcggttactgcggggccgggactaggtacgccggtgcccgtgcaacgtgaagtc
tacgccctggacaccggcgcacattctcgtacgcagtcggtagtgaacgggtcggtagtc
acggaggtggtccgtctttttgacacccttggtcgaatcacttcttatactgatgccgac
aacaatgcatcggtcttttcctatgatgtcgtcgggcgggtggtaagcagtcatgatgga
aaggcgcagcgtacctactcctatgatgaggacactgagcggcgtggcctgctgacctcg
gtcgacgacacccaggcagggcgcttcagcagtacctacgacgccgacggcaacaccacg
tcggaggtatggcccaatggtgtaaccgtcaatatcgagttcaacgagatcggtgaccgg
gttggtcttgtatacgacaagccaaactgttcgtccgaagactgcgtcttgtataccgaa
tcggcggtgcggtcggtgcacggtcaacgcctcgtaggcatttcgagtttctcgcagcag
cgctttgagtacgaccaggctggtcggttggcggtagtggaggacatggtcggcgggcag
tgcgccacccgccggtatgagttaagcgcctcgtcgaattggaacagccttgccgaatac
ggatcatcccccgatgggagctgccaccgcggcgcggccttgacgacccggacgtgggcc
cacgacacagcggatcgggtgaccaacaccggatacgactatgatctcctggggcgtaca
attagtctcccaggagtcgacaccgctaaccctgccggcggcgacgtaactttcacatat
cacgccacggacctggtcgacacgatcacccagaacggaagaaccaccgactatacactg
gacgtgaccggcgagcggattcgctcctggaccgaatacgtcaacggtactgccgagcag
cgtatccaccactatagcggtgaccaggacagcccgtcttggacccaggagacggcgacc
cggtttacgcgaccggtgtccagcgtgaccggcctagcggccatctttgacagtggcgac
accttggattggcagatcagcaacctgcacggcgacctcgtcgccgggataaagcatggc
gacgacggtgcgtcgtggaccagcgagtcgactgagtacggtctcccacgcaatactgcc
agtgtcaaacgctaccactggctcggtagtgcgcagcgagccgccgacgccccggccggg
attatgctgatgggcgtaaggctctataacccgaccaccggccggttcttgcaggtcgat
ccggtttacggtggcagttgtaatcgctatgagtacacctgtgccgaccccataaaccag
actgaccttagtggtaaggcgttgcctggcgtcgttgcagtgctcgttgcattagcgagg
ggtgcctattacgcttgccggatctcaaagtcttggtgcaagcgtgcactcaagtacctg
gttactagagcgggaaggtatctgtggcgggcctactggtgggcggttggcaaggcaaag
gtttattcctccaacgagcgggttaagcgtggtttggattgcggaagagccttatatacc
gcggtgagtaacgtacgctatggtggttataggagtaaggcgattgcatttacagcagga
tttgtgttcggtgcagtaacgaggtggcgttgcttcccgaggggcaagtactcatga
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