Salinispora arenicola: Sare_1858
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Entry
Sare_1858 CDS
T00613
Name
(GenBank) conserved hypothetical protein
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
saq
Salinispora arenicola
Pathway
saq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
saq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Sare_1858
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
saq03400
]
Sare_1858
Enzymes [BR:
saq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Sare_1858
DNA repair and recombination proteins [BR:
saq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Sare_1858
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
zf-HIT
Motif
Other DBs
NCBI-ProteinID:
ABV97743
UniProt:
A8LY26
LinkDB
All DBs
Position
2143314..2145191
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AA seq
625 aa
AA seq
DB search
MPESLDAEAAPGTRVKVRFAGQLVNGWLLERVGESSHPRLAYLEKVVSPEPVLAPEIARL
ARAVADRYAGSLADVLRLAVPPRHARVEKEPPPSPAADPESPDPGSGPSHPDGWSGYPAG
PALLRALTDGRAPRAVWSALPGEDWPARYAEAVAATVAGGRSAVVVVADARDLDRLDPAM
TAVLGPGRHVQLTAALGPARRYRAFLAARRGQVPVVIGTRAAMFAPVPRLGLVAVWDDGD
DLHAEPRAPYPHAREVLLTRAQLATCAALVGGYARTAEAQLLVETGWAREVTAVRAAVRA
RMPAIAPTGDDPQLARDPGAATARLPSLAWNAARDALSVDAPVLVQVPRRGYLPAVACAT
CRTPARCPHCHGPLGLPSARAAPLCRWCGRVAAAYACPECRGRRLRASVTGARRTAEELG
RAFPGVPVRTSGREEVLAAVPGGPGLVIATPGAEPVADGGYGAVLLLDSWALLTRADLRA
GEEALRRWLAAAALARPGAAGGRVVVVADGGLAPVQALLRWDAGWFAARELAERRELGFP
PAVRMVSVTGTPAAVTDLLTETRLPAAAEVLGPVPADGDRERMLVRTPRTQAAVLAAALH
AAAGVRTARKAADPVRLQVDPLTLF
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgagtccctcgatgccgaggccgcgcccggcacccgggtgaaggtccgcttcgcc
ggtcagttggtcaatggctggctgttggaacgggtcggcgaatcctcgcacccacggctg
gcgtacctggagaaggtcgtctccccggagccggtcctcgcaccggagatcgcccgactg
gcccgcgctgtcgccgaccggtacgccggcagcctcgccgacgtgctccgactcgctgtt
ccgccccggcacgcccgggtcgagaaggagccaccaccgtcgcccgcggccgacccggag
tcgccggatcccggaagcgggccatcgcacccggacggctggtcgggctacccggccgga
ccggccctcctgcgggctctcaccgacggccgcgccccccgcgcggtctggtcggccctg
ccaggcgaggattggcccgcccggtacgccgaggcggtcgccgccaccgtcgccggcggc
cggagcgcggtcgtggtcgtggccgacgcccgcgacctcgatcgcctcgacccggcgatg
accgccgtgctgggacctggccggcacgtccagctcaccgccgcgctcggcccggcccgc
cggtaccgggcgttcctcgccgcgcggcgaggtcaggtgccggtggtgatcggcacccgg
gccgccatgttcgccccggtgccccgactcgggctcgtcgcggtctgggacgacggtgac
gacctgcacgccgaacctcgggccccctatccacatgcccgcgaggtgttgctgacccgc
gctcagctggccacgtgcgctgccctcgtcggcggctatgcccgtaccgccgaggcgcag
ctgctggtggaaaccggttgggcccgggaggtgacggccgtgcgggccgccgtccgggcg
aggatgccggcgatcgctcccaccggcgacgacccccaactggcccgggatcccggcgcg
gccaccgctcggttgcccagcctcgcctggaacgcggcgcgcgatgccctgtccgtcgat
gcgccggtgctcgtccaggttccccggcgtggctacctgccggcggtggcctgtgccacc
tgccggacgccggcgcgttgcccgcactgccacggtcccctgggattgccgtcggcgcgg
gctgcaccgctctgccgctggtgtgggcgtgtcgccgccgcgtacgcgtgtccggagtgc
cggggacggcgtctgcgcgcttcggtcaccggcgcccgccggacagcagaggaattgggc
cgggccttcccgggagtgccggtgcgcacctccggccgggaggaggtcctcgcggccgtc
cccggcggccccgggctggtcatcgccaccccgggtgccgagccggtggcggatggtggt
tacggcgccgtgctcctgctcgactcatgggccctgctgacccgggccgacctgcgggcg
ggggaggaggcgctgcggcgctggctcgccgccgccgccctggcccgccccggggcggct
ggcggccgggtggtggtggtggccgacggtgggctcgcccccgtccaggcgctcctccgc
tgggacgccggctggttcgccgctcgcgagctggccgagcgtcgggaactcggcttccct
ccggcggtgcggatggtcagcgtcaccgggacgccggccgccgtcaccgatctgctcacc
gagacccggctaccggcggctgccgaggtgctgggcccggtgcccgccgacggtgaccgg
gaacggatgctggtccggactcctcgcacccaggccgccgtcctggctgcggccctgcac
gcggcggctggcgtgcgcaccgcccgtaaggccgccgacccggttcggctccaggtcgat
cccctgaccctgttctga
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