Salinispora arenicola: Sare_4034
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Entry
Sare_4034 CDS
T00613
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
saq
Salinispora arenicola
Pathway
saq00300
Lysine biosynthesis
saq00470
D-Amino acid metabolism
saq01100
Metabolic pathways
saq01110
Biosynthesis of secondary metabolites
saq01120
Microbial metabolism in diverse environments
saq01230
Biosynthesis of amino acids
Module
saq_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
saq00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Sare_4034
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Sare_4034
Enzymes [BR:
saq01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
Sare_4034
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
GCH_III
Motif
Other DBs
NCBI-ProteinID:
ABV99824
UniProt:
A8M2L5
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All DBs
Position
complement(4590526..4591938)
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AA seq
470 aa
AA seq
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MRAHEAGALHGEIGSRGPAWLRAPLDVNALVPGLWPRTVSRAADGALAVAGCSVRDLAAE
FGTPVYVLDEEDLRTRCRDFRAAFPTEDVYYAGKAFLCRAVVRMIAEEGLHLDVCSGGEL
ATALAAGMPPERIGFHGNNKSVAELSRALDAGVGRIIVDSSHEIDRLTGLARERGVRPRV
LVRVTVGVEAHTHEFIATAHEDQKFGFSLAGGAAIAAVLRILDEDVLELRGLHSHIGSQI
FDASGFEVSARRVLALQAQIRDARGVQLPELDLGGGFGIAYTTQDDPATPADLAKRLRKI
VDGECAAERLAVPHLSIEPGRAIVGPAMFTLYEVGTVKSVPVGAGGDTADGHRCYVSVDG
GMSDNIRTALYDASYSATVASRASGAAPVLARVVGKHCESGDIVVKDEFLPADVQPGDLV
AVPGTGAYCRSMASNYNHVLRPPVVAVRDGQARLIVRRETEEDLLALDVG
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgcgcacgaggccggtgccctgcacggggagatcggcagccgtgggccggcgtgg
ctgcgtgccccgctcgacgtgaacgccctggtgccggggctgtggccgcgcaccgtcagc
cgtgcggcggacggtgcgctcgcggtcgcgggttgttcggtgcgggacctcgccgccgag
ttcggcacgccggtctacgtgttggacgaggaggacctgcggacccgctgtcgggacttc
cgtgccgcttttccgaccgaggacgtctactacgccggtaaggcgttcctctgccgcgcg
gtggttcggatgatcgccgaggagggcctgcacctggacgtgtgcagcggtggcgagttg
gccaccgcgctggcggccgggatgccgccggagcggatcggcttccatggcaacaacaag
tcggtcgccgagctgagccgggcgctggacgccggggtgggccggatcatcgtcgactcg
tcccacgagatcgaccgactaaccgggttggctcgcgagcggggcgtccgcccacgggta
ctggtgcgggtcaccgtcggcgtggaggcgcacacccacgagttcatcgccaccgcacac
gaggaccagaagttcggcttttcgctggcgggaggcgcggcgatcgccgccgtactgcgc
atcctcgacgaggacgtgttggagttacgtggtctgcactcgcacatcggatcgcagatc
ttcgacgcgagcggcttcgaggtctccgcccgccgggtgctggcgctccaggcgcagatc
cgcgacgcgcggggagtgcagttgcccgagctggacctgggtggcggcttcggcatcgcg
tacacgacacaggacgacccggccacgccggccgatctggcgaagcggctacggaagatc
gtcgacggggagtgcgccgccgagcggctggccgtgccgcacctgtccatcgagccgggc
cgggcgatcgtcggtccggccatgttcacgctctacgaggtgggcacggtcaagtccgtg
ccggtcggcgccggtggggacaccgctgacgggcaccgctgctatgtgagcgtcgacggc
ggaatgagtgacaacatccggaccgcgctctacgacgcgtcctactcggcgacggtggcc
tcccgggcgagcggtgccgcgccggtgctcgcccgcgtggtgggaaagcattgtgagtcc
ggggacatcgtggtgaaggatgagttcctgcccgccgacgtgcagcccggagatcttgtc
gcggtgcccggtacaggtgcgtactgccggagcatggccagcaactacaaccacgtgctg
cgcccgccggtggtcgcggtgcgcgacggtcaggcccgcctgatcgtccgccgggaaacc
gaagaggatctgctcgctttggatgtgggatga
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