Salinispora arenicola: Sare_4120
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Entry
Sare_4120 CDS
T00613
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
saq
Salinispora arenicola
Pathway
saq03420
Nucleotide excision repair
saq03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
saq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Sare_4120
03430 Mismatch repair
Sare_4120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
saq03400
]
Sare_4120
Enzymes [BR:
saq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Sare_4120
DNA repair and recombination proteins [BR:
saq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Sare_4120
MMR (mismatch excision repair)
Other MMR factors
Sare_4120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
DUF1805
DUF6484
Motif
Other DBs
NCBI-ProteinID:
ABV99910
UniProt:
A8M3E7
LinkDB
All DBs
Position
complement(4679499..4681658)
Genome browser
AA seq
719 aa
AA seq
DB search
MVSHSASDRVLAGLDPEQRAAVTAPAGPVCVLAGAGTGKTRAVTSRIAHRALTGEILSRH
LLAVTFTARAAAELRSRLTALGVPGVQARTFHAAALRQVRYFAPRLLAGRAMPELLDSKV
RLVTLAAAKVGIRADRTGTRDLAGEIEWAKSSLVEPGEYVVAAAKALRETPYEPARVADV
FAAYEQVKRSGGVIDFEDMLRAAIWGIEEHPDVADQVRAQYRHFVVDEYQDVNPLQQRLL
EAWLGGGDDLTVVGDASQTIYSFTGATSSYLVDFPRRHRSATVVRLVRDYRSTPQVVGLA
NAVISPARGSEARLRLELVGQRPPGPEPDLRIFTDEPAEAAAVAARCRALIDAGTPAREI
AVLFRTNAQSEVYEKALTEAEVPYQVQGAERFFERVEIRQAMVALRAATRSLPGGIPLPA
AVVEALAAVGWAPDTPPAGGAARERWAALAALVQLAEEYAAAAPVVPIGPAAAVERPATL
ADFTDELARRAAAQHAPTVEGVTLASLHSAKGLEWDAVFLVGLAEGTLPTLYAKTPEQVE
EERRLLYVGITRAREWLWLSYASARSPGGRPRRPCRFLPRLSPSGGSGRAGAGGARPSER
RRTQIVSCRICGATLLAGAERKLGRCAACPSDIDEELHGRLREWRRRMAAGQRVPAYVVF
TDATLVALAERRPQQPRDLTAIAGIGARKLGLYGEAVLALVAGAAVDEVCPERTSEILP
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
gtggtgtcccactcagcctccgaccgggtgctcgccgggctcgacccagagcagcgggcg
gcggtgaccgccccagccggcccggtctgtgtgctcgccggcgccggtactggcaagacc
cgggcagtcacctcccggatcgcccaccgggcgttgaccggggaaatcctgtcccggcat
ctgctcgcggtcactttcaccgcacgggccgccgccgagctgcgcagccggctcaccgca
ctcggggtgcccggcgtacaggcgcgaaccttccacgccgcggcgctccgtcaggtgcgc
tacttcgcgccccggctgctcgccggtcgggcgatgcccgagctgctggacagcaaggtc
cggctggtcaccctcgccgccgcgaaggtcggaatccgcgcggaccggaccggtacccgg
gacctcgcgggcgagatcgagtgggccaagtcgtccctggtcgagcccggggaatacgtg
gtcgcggcggccaaggcgttacgcgagaccccgtacgagccagcgagagtcgccgacgtc
ttcgccgcgtacgagcaggtcaagcgttccggcggggtgatcgacttcgaggacatgctg
cgtgccgcgatctggggcatcgaggagcatcccgacgtggccgaccaggtacgcgcccag
taccggcactttgtcgtggacgagtaccaggatgtgaacccgctccagcaacggctgctg
gaggcgtggctcggcggcggagacgacctgaccgtggtgggtgacgcgagccagaccatc
tactcgttcaccggcgcgacctcctcctatctggtcgacttcccgcgtcggcaccgcagt
gcgaccgtggtccgcctggtgcgtgactaccggtccaccccccaggtggtcgggttggcc
aacgcggtgatctcaccagcccggggctccgaggctcggttgcggttggagttggtcggc
cagcgcccaccaggccccgagcccgacctgcggatcttcaccgacgagccggccgaggcc
gccgccgtcgccgcccgctgccgggccctgatcgacgccggcacgccggcccgggagatc
gctgtgctgttccggaccaacgcgcagtccgaggtctacgagaaggcgctgaccgaggcc
gaggtgccgtaccaggtgcagggtgcggagcggttcttcgagcgcgtcgagatacggcag
gcgatggtcgcgctgcgcgccgccacccgctccctccccggcgggatcccactgccggcg
gccgtggtcgaggcgttggccgccgtgggctgggctccggatacgccaccggccggtggc
gccgcccgcgagcggtgggcggccctcgccgcgctggtccaactcgccgaggagtacgcg
gccgccgcgccggtggtgccgatcgggccggccgccgcggtcgaacgcccggccaccctg
gccgacttcaccgacgagctggctcgacgtgccgccgcccagcacgcgccgacggtcgag
ggcgtgacgctcgcctccctgcattcggcgaagggcctggaatgggatgccgtctttctg
gtcggcctcgccgagggcactctgcccaccctgtacgcgaagacaccggagcaggtggag
gaggaacgccggttgctctacgtgggcatcacccgggcccgggagtggctctggctgtcg
tacgcgtcggcccgttcacccgggggacggccccggcggccctgccggttcctgccgcgg
ctgagtccttccggtgggagcgggcgggccggtgcgggcggggcccggcctagcgagcgt
cggcgtacccagatcgtttcctgccggatctgtggtgcgaccctgctcgccggcgcggag
cgcaagctgggccggtgcgccgcctgtccgtccgacatcgacgaggagctgcacgggcgg
ctgcgcgagtggcggcgtcggatggccgccggtcagcgggtgccggcctacgtggtgttc
accgacgcgaccctggtcgcgttggctgagcggcgccctcagcagccccgtgacctcact
gcgatcgctgggatcggggcccgcaagctggggctctacggcgaggcggtgctggcgctg
gtagccggcgcggcggtggacgaggtctgcccggagagaacttcggaaatcttgccgtaa
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