Salinispora arenicola: Sare_4130
Help
Entry
Sare_4130 CDS
T00613
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
saq
Salinispora arenicola
Pathway
saq03420
Nucleotide excision repair
saq03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
saq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Sare_4130
03430 Mismatch repair
Sare_4130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
saq03400
]
Sare_4130
Enzymes [BR:
saq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Sare_4130
DNA repair and recombination proteins [BR:
saq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Sare_4130
MMR (mismatch excision repair)
Other MMR factors
Sare_4130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
AAA_30
UvrD_C_2
DEAD
Motif
Other DBs
NCBI-ProteinID:
ABV99920
UniProt:
A8M3F7
LinkDB
All DBs
Position
complement(4689250..4692738)
Genome browser
AA seq
1162 aa
AA seq
DB search
MTQPTLFSAATPTPRTADAGPRYTPVELAKLLRLPAPTREQAAVIAAPVEPLLVVAGAGS
GKTETMAARVVWLVANSYVHPEQVLGLTFTRKAAGELAHRVRARLSQLVRRLGRRGRDPQ
DESLAGEPTIATYHSYAGRVVTEHGLRAGYEPATRLLTEASRWQLVDLIVRNYDGDMSEV
DRMPSTITDAVLALAGELDEHLVEPDHLAGWTGRFFADVQSRPGRVYADVRRALTLQQIR
LKLLPLVRAYARRKRDFEAMDFADQLARAARVARDHPVVGEIERDRYRVVLLDEYQDTSH
AQVVLLNALFGGGHPVTAVGDPCQSIYGWRGASAGTLDRFPTEFARADGVPAQVRTLTTS
WRNRPEVLGVANALATPLRAAGARVPELHAALSVKEPIPHRTPRGSAAGTVHCALLDTYA
DEAEWIADSLLRAWQGAAGAPGAVPEHLPVAARPTTAVLVRLRSQIPAIESALRARGLPV
DVVGLGGLLDTPEVRDVVCTLRVLADPTDGAALLRLLTGARWRIGPRDLVALHRRARAIA
AARRKLTAGDEPEIVPDALDEATLVEALADLGPAPAYSAEGYARFRAAAQELGLLRYRLD
QSLPDLIADVERTIGLDVEVAVRAGRDGAGDAGLARGHLDALGDVAARFSGETPGATLSA
FLAYLAAAEDEERGLAPGEVEVVEGAVQVLTAHAAKGLEWDVVAVAGLSRGVWPGPVRNS
DHWLGGLGVLPFPLRGDADGLPVLELAEAGEQRGVAQALADFTAAWRAHDEREERRLAYV
AVTRPRRLLLCSGYWWGEGTKRARGPSALLRDVHGACLDAGAGLVVDEWAAEPAPDAVNP
TTEVVLRAEWPADPLGDRRPALAEAATLVRRFLTDGDPTTRAATGAVATAAPGDDDAEDD
DPEVVRWRREADLLLAERAELTRHAGPVEVALPAALSVTQLVALRRDPAALARSLRRPLP
TEPNPYARRGTAFHAWLEQRFGAGRLLDVDELPGAADADAAPDEALAELQERFLHSEWAD
RTPVEAEVPFATVIAGVVVRGRMDAVFGRPGGRFDVVDWKTGRQPAGPAAAAAAVQLAVY
RLAWAELAGVPVERVGAAFHYVRDGATVRPVDLLDVAGLTALIESVPERPAAPDPAVRAS
TDRVGNERRSGPNGDCVRPRGR
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
gtgacccagccgaccctgttcagtgcggcgaccccgaccccccgtacggccgacgccgga
ccccggtacaccccggtcgagttggcgaagctgctgcgactgccggcacccacccgggaa
caggcggcggtcatcgccgcgccggtggagccgttgctcgtcgtcgcgggcgccggttcc
ggcaagaccgagacgatggccgcgcgggtggtctggctggtggccaactcgtacgtccac
ccggagcaggtgctcggcctgacgttcacccgcaaggccgccggagagctggcgcaccgc
gtccgggcccggctctcccagctcgtccgccggctcggccggcgcgggcgcgacccgcag
gacgagtcgttggccggggaaccgacgatcgccacctaccactcgtacgctgggcgggtg
gtgaccgagcacgggctgcgtgccgggtacgagcccgccacccggctactcaccgaggcg
tcccgctggcagctcgtggacctgatcgtgcgcaactacgacggtgacatgtccgaggtg
gatcggatgccgagcaccatcaccgacgcggtgctggcgctcgccggcgagctggacgag
cacctggtcgagccggaccatctggccggctggaccgggcggttcttcgccgacgtgcag
tcccgccccggccgggtgtacgccgacgttcgtcgggccctcacgcttcaacagatccgg
ttgaagttgcttccgttggtccgggcatacgcccggcgcaagagggacttcgaggcgatg
gacttcgccgatcagttggcccgggccgcccgggtcgcgcgggatcacccggtggtcggc
gagatcgagcgggaccgctaccgggtggtgttgctcgatgagtaccaggacaccagccat
gcccaggtggtgctgctcaacgcgctcttcggtggcgggcacccggtgaccgccgtcggt
gacccctgccagtcgatctacggctggcgcggggcgagcgcgggtaccctcgaccgtttt
cccaccgagttcgcgcgggccgacggcgttccagcccaggttcgtacgctgacgaccagt
tggcgaaaccggcccgaggttcttggggtggcgaatgccctcgccaccccgctacgtgcc
gcaggtgcccgggtgccggaactgcacgccgcgctcagcgtcaaggagccgatcccgcac
cgtaccccgcgaggcagcgccgccggcaccgtccactgcgcgttgttggacacgtacgcg
gacgaggcggagtggatcgccgacagcctgctgcgtgcctggcagggcgcggcgggagcg
cccggcgcggtgcccgagcaccttccggtcgcggcccgccccaccactgcggtgctggtg
cggctacgcagccagatcccggccatcgagtcggcgctgcgggcccggggcctgccggtc
gacgtggtggggctcggtggcctgctggacacgccggaggtacgggacgtggtgtgtacc
ctgcgggtgctcgccgacccgaccgacggggcggcactgctacggctgttgaccggcgcc
cgatggcggatcgggccacgggacctggtggccctgcaccgccgggcgcgggccatcgcc
gccgcccgccggaagctcacggccggtgacgagccggagatcgttccggacgcgctggac
gaggcgaccctggtggaggcgctggccgacctgggcccggcgccggcgtactcggcggag
ggttatgcccggtttcgcgccgccgcgcaggaactgggcttgttgcgttatcggctggac
cagtcgctgccagacctgatcgcggacgtcgagcggacgatcggcctggatgtggaggta
gcggttcgcgccggtcgggacggggccggtgatgctgggctggcccgggggcacctggat
gcgctcggcgatgtcgcggcccggttcagcggggagacgccgggtgccacactgtcggcc
ttcctggcctatctcgcagcggcggaggacgaggagcgagggctcgcccccggtgaggtg
gaggtggtcgagggggcggtgcaggtgctcaccgcgcacgcggccaagggcctggagtgg
gatgtcgtggcggtggcggggctcagtcgcggggtgtggcctggtccggtgcgcaattcg
gaccactggctgggcgggctgggggtactgccgttcccgctccggggcgacgccgacggg
ttgcccgtgttggaactggccgaagcgggcgaacagcgcggggtggcgcaggctctggcg
gacttcaccgctgcgtggcgggcgcacgatgagcgggaggagcggcgtctggcctatgtc
gcggtgactcgtccccgccgactactgctctgctccgggtactggtggggggagggcacg
aaacgtgcgcgcggcccgtccgcgttgctccgcgacgtgcacggagcctgcctggacgcg
ggtgccgggctcgtggttgacgaatgggccgcggagcccgccccggacgcggtgaatccc
accaccgaggtggtgctccgggcggagtggccggccgatccgttgggggaccgtcgaccg
gcgctcgccgaggcggccacgctggtccggcgcttcctgaccgacggggatccgaccacc
cgcgcggcgaccggcgccgttgcgaccgcagctccgggtgacgacgacgcggaagacgac
gatccggaggtggtgcgctggcggcgggaggccgacctgctcctcgccgaacgtgccgag
ctgactcggcacgccgggccggtcgaggtcgcgctgcccgctgcgctgtcggtcacccaa
ctggtggcgctgcggcgggatccggcggccctggccaggtcgctgcgccggcccttgccc
accgagccgaacccgtacgcccgtcggggcaccgccttccacgcctggctggagcagcgg
ttcggggccgggcggttgctcgacgtggatgagctgcccggtgccgcggacgcggatgcc
gcgccggacgaggcgctggccgaactccaggagcgcttccttcacagcgagtgggccgac
cggacgcccgtcgaagccgaggtgccgttcgcgacggtgatcgccggtgtcgtggtccgg
gggcggatggacgcggtcttcggccggcctggcggacggttcgacgtggtggactggaag
actggccgacagcccgccggaccggccgccgctgcggcggcggtgcagctcgctgtgtat
cggctggcctgggcggagctggcgggagtgccggtcgagcgggtcggggcggcgttccac
tatgtccgggacggggcgacggtgcggccggtggatctgcttgacgtggccggcctcacc
gcgctgatcgagtcggtcccggagcgtcctgccgcccctgacccggccgtccgggccagc
actgaccgagtcggcaatgagcggcggtcgggtccgaatggtgactgtgtccggccgcgc
ggccggtga
DBGET
integrated database retrieval system
