Salinispora arenicola: Sare_4163
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Entry
Sare_4163 CDS
T00613
Name
(GenBank) transcriptional regulator, AraC family
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
saq
Salinispora arenicola
Pathway
saq03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
saq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Sare_4163
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
saq03000
]
Sare_4163
03400 DNA repair and recombination proteins [BR:
saq03400
]
Sare_4163
Enzymes [BR:
saq01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
Sare_4163
Transcription factors [BR:
saq03000
]
Prokaryotic type
Helix-turn-helix
AraC family
Sare_4163
DNA repair and recombination proteins [BR:
saq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Sare_4163
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HhH-GPD
HTH_AraC
DUF6233
Motif
Other DBs
NCBI-ProteinID:
ABV99952
UniProt:
A8M3I9
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All DBs
Position
4727708..4729156
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AA seq
482 aa
AA seq
DB search
MDLDFERCYRAVDSRDQRFDGWFYTGVTSTGIYCRPSCPAITPKRENIRFFPSAAAAQEA
GLRACRRCRPDATPGSPHWDVRADVVGRAMRLIADGVVDRSGVPGLAAQLGYTERHLHRM
LRTELGAGPLALARAQRAQTARTLIETTDLGMAEIAFAAGFGSVRQFNDTVREVYAVAPS
ELRAVRSRRTSPAGPGTITVRLAYRPPLHVGALLDFLAPRALPGVDEVRAGAYHRGLRLP
HGTGEASLTPTDRHVEATLRLSDLRDLAPAVARCRRLLDLDADPTAVDAVLATDPALAAV
VTAEPGVRVPRAVDGFEVAVRAVIGQQVSVASARTTLTRLLNELPTLADRSDGVTGGLHA
FPSAEEVRNAPDSAFRMPAARRETLRRLAGAVAAGELDLEPGGDRKETRQRLLALSGIGA
WTADYITLRALGDPDVFLPTDVAVRRGAAALGLPSTPDTLHTYADRWRPWRSYAVSRLWR
AA
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
gtggacctggacttcgagcggtgttatcgggccgtcgacagccgtgaccagcggtttgac
ggctggttctacacgggcgtgacctccaccggcatctactgtcggccgtcttgtccggcg
atcactccgaaacgggagaacatccggttctttccgtcggccgccgcagcgcaggaggcc
gggcttcgggcctgccgtcggtgccggccggatgcgaccccgggctcaccgcactgggac
gtccgcgccgacgtggtcggtcgcgccatgcgactgatcgccgacggcgtggtcgaccgg
tccggggtacccggcctggcggcacagctcggctacacagagcggcacctgcaccggatg
ctccgcaccgaactgggggccggcccgctcgcgctggcccgcgcgcagcgcgcgcagacc
gcgcggaccctgatcgaaaccaccgacctcggaatggcggagatcgcgttcgccgccggg
ttcggcagcgttcggcagttcaacgacacggtccgcgaggtgtacgcggttgccccgtcc
gagcttcgagcggtccggagccgacggacgtcccccgccggacccggaacgatcaccgta
cggctggcgtatcggcccccactgcatgtcggggcgctgctggacttcctcgccccgcgg
gcgctgcccggtgtcgacgaggtgcgcgcgggggcctatcaccgcggcctgcggctgcca
cacggcaccggcgaggcttcgctgactccgacggacaggcacgtggaggcgaccctacgc
ctgtccgacctgcgggacctggcgccggcggtggcccgctgccgccggctgctcgacctc
gacgccgacccgacggcagtggacgccgtcctggccaccgaccccgccctggccgccgtg
gtcacggcggagcccggagtccgggtgccgcgcgcggtcgacggcttcgaggtggccgtc
cgcgcggtcatcggccagcaggtctcggtggcgtccgcccgcaccaccctcacccgtctc
ctgaacgagctacccaccctggccgacaggtcggatggggtgaccggtggattgcacgcg
tttccctccgccgaggaggtgcgcaacgcgccggactcagcattccggatgccggccgcc
cgccgggagacgctgcgccggctcgcgggggcggttgccgccggggagctcgacctggaa
ccgggtggggatcggaaggagacccggcaacggctgctggcgctgtcgggcatcggcgcg
tggacggcggactacatcacgctccgcgcgttgggcgacccggacgtgttccttcccacc
gacgttgccgtccgccggggcgctgccgccctcggtctacctagcaccccggacaccctg
cacacgtacgccgaccgctggcgcccctggcgctcatacgcggtgagccgactttggaga
gcagcatga
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