Salinispora arenicola: Sare_4231
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Entry
Sare_4231 CDS
T00613
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
saq
Salinispora arenicola
Pathway
saq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
saq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Sare_4231
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
saq03019
]
Sare_4231
03110 Chaperones and folding catalysts [BR:
saq03110
]
Sare_4231
03029 Mitochondrial biogenesis [BR:
saq03029
]
Sare_4231
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
saq04147
]
Sare_4231
Enzymes [BR:
saq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
Sare_4231
Messenger RNA biogenesis [BR:
saq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Sare_4231
Chaperones and folding catalysts [BR:
saq03110
]
Heat shock proteins
HSP60 / Chaperonin
Sare_4231
Mitochondrial biogenesis [BR:
saq03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
Sare_4231
Exosome [BR:
saq04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Sare_4231
Exosomal proteins of other body fluids (saliva and urine)
Sare_4231
Exosomal proteins of breast cancer cells
Sare_4231
Exosomal proteins of colorectal cancer cells
Sare_4231
Exosomal proteins of bladder cancer cells
Sare_4231
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
FlgM
Motif
Other DBs
NCBI-ProteinID:
ABW00013
UniProt:
A8M497
LinkDB
All DBs
Position
complement(4803939..4805576)
Genome browser
AA seq
545 aa
AA seq
DB search
MAKILSFSDDARHQLEHGVNALADAVKVTLGPRGRNVVLDKKFGAPTITNDGVTIAKEIE
LTNPYENLGAQLVKEVATKTNDVAGDGTTTATVLAQALVREGLRNVAAGANPTGLKRGID
AAATKVSEELLGKAVDVSDKAAIAHVATVSAQDSTIGELIAEAMERVGRDGVITVEEGST
LATELDVTEGLQFDKGFISPNFVTDAEGQESVLEDAYILITTQKISAIEELLPLLEKVLQ
ESKPLLIIAEDVEGQALSTLVVNALRKTMKVCAVKAPGFGDRRKAMLQDMAILTGAELVA
PELGYKLDQVGLEVLGTARRVVVDKENTTIVDGGGQASDAEDRVAQIRKEIEASDSEWDR
EKLAERLAKLSGGIAVIRAGAATEVEMKERKHRIEDAIAATKAAVEEGTVPGGGAALAQV
LPALDGDLGLTGDEQVGVSIVRKALIEPLRWIAQNAGHDGYVVVQKVAGKDWGHGLDAAT
GEYVDLAKAGILDPVKVTRNAVANAASIAGLLLTTESLVVEKPQEPEPAAAGHGHGHGHQ
HGPGF
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagatcctgagcttctcggacgacgctcggcaccagctggagcacggtgtcaac
gccctcgcggacgcggtcaaggtcaccctcggcccccgcgggcgcaacgtcgtcctagac
aagaagtttggtgcacccacgatcaccaacgacggcgtgacgatcgccaaggagatcgag
ctcaccaacccatacgagaatctcggcgcgcagttggtcaaggaggtggcgaccaagacc
aacgacgtcgccggcgacgggaccaccaccgccaccgtgctggcccaggcgctggtccgg
gagggcctgcgcaacgtggcggccggcgccaacccgaccggcctcaagcggggcatcgac
gcggcggcgaccaaggtctccgaggaactgctcggcaaggccgttgacgtgtccgacaag
gcggcgatcgcccacgtcgcgaccgtctccgcgcaggactccacgatcggcgagctcatc
gccgaggcgatggagcgggtcggccgcgacggtgtcatcaccgtcgaggagggctccacc
ctcgccaccgaactggacgtgaccgagggtctccagttcgacaagggcttcatctccccc
aacttcgtcaccgacgcggaggggcaggagtcggtcctggaggacgcgtacatcctgatc
accacgcagaagatctcggcgatcgaggagctgctgccgctgctggagaaggtcctccag
gagagcaagccgctgctcatcatcgccgaggacgtcgaggggcaggcgctgtccaccctg
gtggtcaacgcgctccgcaagaccatgaaggtctgcgcggtgaaggctcccggcttcggc
gaccgccgcaaggcgatgctgcaggacatggcgatcctgaccggtgccgagttggtcgcc
cccgagctgggctacaagctcgaccaggttgggctcgaggtgctcggcaccgcccgccgc
gtggtggtcgacaaggagaacaccaccatcgtcgacggcggcggccaggcatccgacgcc
gaggaccgggtcgcccagatccgcaaggagatcgaggcttcggactccgagtgggaccgg
gagaagctcgccgagcggctggccaagctctccggcggcatcgccgtgatccgggcgggc
gcggcgaccgaggtcgagatgaaggagcgtaagcaccgcatcgaggacgccatcgccgcc
accaaggccgcggtcgaggagggtacggtgcccggcggcggtgccgccctggcccaggtc
ctgccggcgctcgacggcgacctcggcctcaccggggacgagcaggtcggtgtctcgatc
gtgcgtaaggcgctgatcgagccgctgcgctggatcgcgcagaacgccggccacgacggc
tacgtggtggtgcagaaggtcgccggcaaggactggggccacggtctggacgcggccacg
ggcgagtacgtcgacctggccaaggccggcatcctcgacccggtgaaggtgacccgcaac
gcggtcgccaacgccgcgtcgatcgcgggcctgctgctcaccaccgagagcctcgtggtg
gagaagccgcaggagccggagccggccgcggctggccacggccacggccacggtcatcag
cacggcccgggcttctga
DBGET
integrated database retrieval system
