Caldimonas aquatica: OMP39_00645
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Entry
OMP39_00645 CDS
T08587
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
saqa
Caldimonas aquatica
Pathway
saqa00521
Streptomycin biosynthesis
saqa00523
Polyketide sugar unit biosynthesis
saqa00525
Acarbose and validamycin biosynthesis
saqa00541
Biosynthesis of various nucleotide sugars
saqa01055
Biosynthesis of vancomycin group antibiotics
saqa01100
Metabolic pathways
saqa01110
Biosynthesis of secondary metabolites
saqa01250
Biosynthesis of nucleotide sugars
Module
saqa_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
saqa00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
OMP39_00645 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
OMP39_00645 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
OMP39_00645 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
OMP39_00645 (rfbB)
00525 Acarbose and validamycin biosynthesis
OMP39_00645 (rfbB)
Enzymes [BR:
saqa01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
OMP39_00645 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
NAD_binding_4
3Beta_HSD
Polysacc_synt_2
adh_short
Motif
Other DBs
NCBI-ProteinID:
UZD55139
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Position
139249..140316
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AA seq
355 aa
AA seq
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MILVTGGAGFIGSNFVLDWLACRDEPVVNLDLLTYAGNLGNLVSLRGDSRHVFVQGDVCD
AALVRRLLVEYRPRAVVHLAAETHVDRSIQDAAAFVRTNVTGTYVLLEAVRDYWQALGAT
EREAFRFHHVSTDEVYGSLGPEDAPFTEHHPYQPNSPYSASKAASDHLVRAWHHTYGLPV
VTTNCSNNYGPYHFPEKLIPLAIVNALAGKPLPVYGDGLNVRDWLYVKDHCAALRLVLER
GRVGQTYNIGGWNEKTNLEIVRTICRLLDELRPDAAGPHERLITFVADRPGHDRRYAIDA
SKVERELGWRPAETFETGIRKTVQWYLDHPEWVAQVQSGAYRQWIATQYGRVGPA
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgatcctcgtcaccggcggcgccggcttcatcgggagcaatttcgtgctcgactggctc
gcgtgccgcgacgagccggtggtgaacctggatctgctcacctacgcaggcaacctcggc
aacctggtgtcgctgcgcggtgactcgcggcacgtattcgtgcaaggagacgtctgcgat
gcagcgctggtccgccgactgctggtcgagtatcggccccgggccgtggtgcatctcgcg
gcagaaacgcatgtggaccgttcgattcaggatgcggcggcctttgtgcgaacgaacgtg
acgggcacctacgttctgctcgaagcggtgcgtgactattggcaggcgctgggcgcgacg
gagcgcgaggcctttcgcttccaccacgtctccaccgacgaggtctacggctcgctcggc
cccgaggacgcccccttcaccgagcaccacccctaccagcccaacagcccgtactcggcc
agcaaggccgcgagcgaccacctggtgcgcgcctggcaccacacctatggcctgccggtg
gtcacgaccaactgttccaacaactacgggccctaccacttcccggaaaagctcatcccg
ctggccatcgtcaacgcgctggccggcaagccgctgcccgtctacggcgacggcctgaac
gtgcgcgactggctgtacgtcaaggaccactgcgcggcgctgcgcctcgtgctcgagcgc
ggccgggtggggcagacgtacaacatcggcggctggaacgagaagaccaacctcgagatc
gtgcgcaccatctgccgcctgctcgacgagctgcggcccgatgcggccggcccgcacgag
cggctcatcaccttcgtcgccgaccgcccggggcacgaccggcgctacgcgatcgatgcg
agcaaggtcgaacgcgagctcggctggcgcccggccgagaccttcgagaccggcatccgc
aagacggtgcagtggtacctggatcaccccgagtgggtcgcgcaggtgcaaagcggcgcg
taccgccagtggatcgccacccagtacggccgcgtggggccggcatga
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