Schlegelella aquatica: OMP39_02780
Help
Entry
OMP39_02780 CDS
T08587
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
saqa
Schlegelella aquatica
Brite
KEGG Orthology (KO) [BR:
saqa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
saqa03019
]
OMP39_02780 (rnc)
03009 Ribosome biogenesis [BR:
saqa03009
]
OMP39_02780 (rnc)
03036 Chromosome and associated proteins [BR:
saqa03036
]
OMP39_02780 (rnc)
Enzymes [BR:
saqa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
OMP39_02780 (rnc)
Messenger RNA biogenesis [BR:
saqa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
OMP39_02780 (rnc)
Ribosome biogenesis [BR:
saqa03009
]
Eukaryotic type
90S particles
RNase
OMP39_02780 (rnc)
Prokaryotic type
rRNA processing factors
OMP39_02780 (rnc)
Chromosome and associated proteins [BR:
saqa03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
OMP39_02780 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
UZD55531
LinkDB
All DBs
Position
615141..615824
Genome browser
AA seq
227 aa
AA seq
DB search
MTHALDDLQQRLGHRFGDPALLHTALTHRSFGADHNERLEFLGDAVLGLAMSALLYQRFA
ASDEGDLSRVRARLVRQDSLHQVALQLELPRCLRLGEGEARSGGAQRASILADALEALVG
AVYLDAGFPAALAVVQRLFAQALAASDLQAAAKDPKTELQEWLQGRRMALPVYAIVETRG
HAHQQVFVVRCSVDALGVSAQGEGSSRRAAEQEAARAVLATLKSGGR
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
gtgacccacgccctggacgacctgcagcagcgcctcggacatcgcttcggcgacccggcc
ctgctgcataccgcgctcacgcaccgcagtttcggggccgatcacaacgagcggctggag
tttctcggggacgcggtgctcgggctggcgatgtccgccctgctgtaccagcgcttcgcg
gcgtccgacgaaggcgacctctcgcgcgtgcgggcacgcctggttcgccaggacagcctg
caccaggtcgccttgcaactcgaactgccccgctgcctgcgcctcggcgaaggcgaggcc
cgcagcggcggcgcgcagcgcgcctcgatcctcgccgacgcactggaggccctggtcggc
gcggtgtacctcgacgcgggctttccggccgcgctggccgtcgtgcaacgcctgttcgcc
caagcgctcgccgcctcggacttgcaagccgccgcgaaggacccgaagaccgaactgcag
gaatggctgcaggggcggcgcatggccttgcccgtctatgccatcgtcgagacgcggggg
cacgcgcaccagcaggtgttcgtcgtccgctgcagcgtcgacgcgctgggcgtgtcggcg
caaggagagggcagctcgcgccgcgccgccgagcaggaggccgcccgcgccgtcctcgct
acactgaagtctggcgggcgataa
DBGET
integrated database retrieval system