Schlegelella aquatica: OMP39_04260
Help
Entry
OMP39_04260 CDS
T08587
Name
(GenBank) sigma-54 dependent transcriptional regulator
Organism
saqa
Schlegelella aquatica
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_5
HTH_8
Mg_chelatase
AAA_16
HTH_50
AAA_2
MCM
AAA
HTH_23
HTH_30
AAA_19
VpsR
AAA_22
AAA_7
Motif
Other DBs
NCBI-ProteinID:
UZD55800
LinkDB
All DBs
Position
complement(946376..947746)
Genome browser
AA seq
456 aa
AA seq
DB search
MGHALIVEDDADSAEMMAALIASEGFTAATANSLRDARRQLALQEPDIVLLDLMLPDGSG
MELFNDPQTLANSEVVLITGHASLETSIQALRLGAADYLIKPINIKQLQGILSRVMRPSK
LRAELADMKAEFERTGRFGLLWGRSTSMQRVYEQIGRVSGTAITVLITGESGTGKEVVAQ
TIHELSRRRKKLFLAVNCGAISPQLIESEIFGHEKGAFTGADRMHQGFFERAHGGTLFLD
EITEMPLELQVKLLRVLETGTFMRVGSTTPIEADVRIIAATNRVPEQAVAQGKLREDLLY
RLNVFPINLPPLRDRIEDIPLLAEHFLHDICKREGENKRFAPQALQKMQSHRWPGNVREL
RNVVQRAYVMEEGPVIGDEWLVFDAPSAQEQKGPYITVRVGTPLADVERSLILATLQHFN
SHKEKTAAALGVSLKTLYNRLKEYSQEGSSGGSESS
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgggccacgcactcatcgtcgaggacgatgccgattcggccgaaatgatggcggccttg
atcgcgagcgagggcttcactgcagccaccgccaacagcctgcgcgatgcgcgtcggcag
ctggcgctgcaggagcccgacatcgtgctgctggatctgatgctgcccgacggcagcggg
atggagctgttcaacgatccgcagacgctcgccaattcggaggtcgtgctgatcaccggc
cacgccagcctggagacttcgatccaagcgctgcgcctgggcgccgccgactatctcatc
aagcccatcaacatcaagcagttgcagggcatcctgtcgcgcgtcatgcgcccgtccaag
ttgcgcgccgagctggccgacatgaaggccgagttcgagcgcaccggccgtttcggcctg
ctgtgggggcgttcgacgtccatgcagcgcgtctacgagcagatcggccgcgtctccggg
acggcgatcaccgtgctcatcaccggcgaaagcggcaccggcaaggaagtcgtcgcgcaa
accatccatgagctgagccgccggcgcaagaagctcttcctcgcggtgaactgcggggcc
atctccccgcaactcatcgaaagcgagatcttcggccacgagaaaggcgccttcacgggc
gccgaccgcatgcaccagggcttcttcgagcgcgcccacggggggacgctgttcctggac
gagatcaccgagatgccgctcgagttgcaggtcaagctcctgcgcgtgctcgagacgggc
accttcatgcgtgtgggttccaccaccccgatcgaggccgacgtgcgcatcatcgccgcg
accaaccgggtgccggagcaggccgtggcccagggcaagctgcgggaggatttgctctac
cgcctgaacgtcttcccgatcaatctgcccccgctgcgcgaccgcatcgaggacattccg
ctgctggcagagcacttcctgcacgacatctgcaagcgcgaaggcgagaacaagcgcttc
gcgccgcaagccctgcagaagatgcaaagccatcgctggcccggcaacgtgcgcgagttg
cgcaacgtggtgcagcgcgcctacgtaatggaagaaggccccgtcatcggtgacgagtgg
ctggtcttcgacgccccgagcgcgcaggagcagaagggcccgtacatcaccgtgcgtgtc
ggcaccccgctggccgatgtcgagcgctcgctgatcctcgccaccttgcagcacttcaac
agccacaaggaaaagacggccgccgcgctgggcgtgagcctcaagacgctgtacaaccgg
ctcaaggagtactcgcaggagggctcctcgggtggaagcgaatcgagttga
DBGET
integrated database retrieval system
