Caldimonas aquatica: OMP39_04790
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Entry
OMP39_04790 CDS
T08587
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
saqa
Caldimonas aquatica
Pathway
saqa03030
DNA replication
saqa03410
Base excision repair
saqa03420
Nucleotide excision repair
saqa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
saqa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
OMP39_04790 (polA)
03410 Base excision repair
OMP39_04790 (polA)
03420 Nucleotide excision repair
OMP39_04790 (polA)
03440 Homologous recombination
OMP39_04790 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
saqa03032
]
OMP39_04790 (polA)
03400 DNA repair and recombination proteins [BR:
saqa03400
]
OMP39_04790 (polA)
Enzymes [BR:
saqa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
OMP39_04790 (polA)
DNA replication proteins [BR:
saqa03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
OMP39_04790 (polA)
DNA repair and recombination proteins [BR:
saqa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
OMP39_04790 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
OMP39_04790 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
UZD55899
UniProt:
A0ABY6MV89
LinkDB
All DBs
Position
1059463..1062249
Genome browser
AA seq
928 aa
AA seq
DB search
MSDNLLLLVDGSSYLYRAFHALPDLRSPDGRPTGAIYGMVGMLRKLRTQFPARYAACVFD
AKGETFRNQWYADYKAHRPPMPPALAEQIAPIHEVVRLLGWPVLEVPGVEADDVIGTLAR
LVREQGGRVIVSTGDKDLAQLVSEQVMLINTMSNESLDVEGVKAKFGVPPELIVDYLTLV
GDAVDNIPGVDKVGPKTAAKWIQEYGSLEGVIAAADKIKGVAGENLRRALDWLPQGRRLV
TVACDCDLSGHIPGWPSLEALALQDVDKPGLLAFYERHGFKTWRRELEQELAQKAGEGAG
EGALRGVPPGASADLFGVAAATPAAPSERRYDTVLDFDTLERWIARLKAAPIAALDTETD
SLDAMRARLVGISFSVEPGEAAYVPLAHGYAGAPAQLPLDEVLQRLRPWLEDERYPKLGQ
HVKYDLHVFANHGIRVKGYVHDTMLQSYVLEAHRPHNLDSLAQRHLDRRGITYEDVCGKG
AAQIPFAQVDVAKAAHYSCEDSEMALELHRKLWPRIEAEAGLRFVYERIEMPVSALLQRI
ERHGVLIDAERLQRQSQELGQRILALEAEAHELAGQPFNLGSPKQICEVLFTKLQLPVLK
KTPSGTPSTDEEVLEKLAQDYPLPAKILEHRGLSKLKGTYTDKLPQMINPATGRVHTTYA
QAVAVTGRLSSNEPNLQNIPIRTPEGRRIREAFVAPPGHFMVSADYSQIELRIMAHISGD
ANLMRAFTEGLDVHRATAAEIFNVLPQQVTSEQRRYAKVINFGLIYGMSAFGLASNLGIE
QKAARDYIDRYFQRYPDVKRYMDETRAQAKERGYVETVFGRRLWLPEINSPNGPRRSAAE
RAAINAPMQGTAADLIKLSMIAVQEALDAQGMATRMVMQVHDELVFEVPQAELEWVRREV
PRIMAGVATLKVPLVAEVGVGANWDEAH
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacaacctcctgctgctggtcgacggctccagctacctctaccgtgcctttcac
gccctgccggacctgcgcagcccggacggccggcccaccggtgcgatctacgggatggtc
ggtatgttgcgcaagctgcgcacgcagtttccggcccggtacgcggcgtgcgtgttcgat
gcgaagggcgagacatttcgcaaccagtggtatgcggattacaaggcccatcgtccgccc
atgccgccggccctggccgagcagatcgccccgatccatgaagtggtgcgcctgctgggc
tggcccgtgctggaggtgccgggcgtggaggccgatgacgtgatcggcacgctggcgcgc
ctggtgcgcgagcaaggcggccgcgtgatcgtctccaccggcgacaaggacctggcgcag
ctggtgagcgagcaggtcatgctcatcaacacgatgagcaacgagtcgctcgatgtcgaa
ggcgtgaaggccaagttcggcgtgccgcccgaactcatcgtcgactacctcaccctggtg
ggcgatgcggtggacaacatccccggcgtcgacaaggtggggcccaagacggcggccaag
tggatccaggaatacggctcactggagggcgtgatcgccgcggccgacaagatcaagggc
gtggcgggcgagaacctgcggcgcgcgctggattggctgccccaggggcgccgcctggtg
acggtggcgtgcgattgcgacctgtccgggcacattccgggctggccctcgctggaggcc
ctggcgctgcaggacgtggacaagcccggcctgctcgccttctacgaacggcacggtttc
aagacctggcgcagggaactggagcaggagctggcccagaaggcgggtgagggagcgggg
gagggggcgctgcgcggcgtgccgccgggcgcaagcgccgacctgttcggcgtggcggcg
gccacgccggcggcgcccagcgagcggcgctacgacacggtgctggacttcgacacgctg
gagcgctggatcgcacggctgaaggcggcgccgatcgccgcgctggacaccgagacggac
tcgctcgatgccatgcgggcgcggctcgtcggcatttcgttcagtgtcgagccgggcgag
gccgcctatgtgccgctcgcgcacggctacgcgggggctccggctcagctgccgctggac
gaggtgttgcagcggctgcggccttggctggaggacgagcgctatcccaagctcggccag
cacgtgaagtacgacctgcacgtgttcgccaaccacggcatccgggtgaagggctacgtg
cacgacacgatgctgcagagctacgtgctcgaggcgcatcgcccgcacaacctcgacagc
ctcgcgcagcgccacctggaccggcgcggcatcacctacgaggacgtgtgcggcaagggt
gcggcgcagattccgttcgcgcaggtggacgtcgccaaggcggcccattactcctgcgag
gacagcgagatggcgctcgaactgcaccgcaagctgtggccccggatcgaggccgaggcc
gggctgcgcttcgtgtacgagcgcatcgagatgccggtgtcggcgctgctgcagcgcatc
gagcggcatggcgtgctgatcgacgccgagcgcctgcagcgccagagccaggagctgggg
caacgcatcctggcgctcgaagccgaggcgcatgagctggccggccagccgttcaacctc
ggcagccccaagcagatctgcgaggtgcttttcaccaagctgcaactgccggtgctcaag
aagacgccgagcggcacgccgtccaccgacgaggaggtgctggagaagctggcgcaggac
tatcccctgccggccaagatcctcgagcaccgcgggctgtccaagctgaagggcacttac
accgacaaactgccccagatgatcaacccggcgaccggtcgtgtgcacaccacgtatgcg
caggcggtggcggtgacgggtcgcttgtccagcaacgaacccaatctgcagaacatcccg
atccgcacgcccgaagggcggcgcatccgcgaggcgttcgtcgcgccgccggggcatttc
atggtctcggccgactactcgcagatcgagctgcgcatcatggcgcacatctcgggtgac
gcgaacctgatgcgcgccttcaccgaggggctggacgtgcaccgggcgacggccgccgag
atcttcaacgtgttgccgcagcaggtcaccagcgagcagcgccgctacgccaaggtgatc
aacttcggcctcatctacggcatgagcgccttcggcttggcgagcaatctcggcatcgag
cagaaggccgcgcgcgactacatcgatcgctatttccagcgctatccggacgtcaaacgc
tacatggacgagacgcgcgcacaagccaaggagcgcgggtatgtggagaccgtcttcggc
cggcggctgtggttgccggagatcaacagccccaacgggccgaggcgcagcgccgcggag
cgcgcggcgatcaacgcgcccatgcagggaacggcggccgacctgatcaagctgtcgatg
atcgcggtgcaggaggcgctcgacgcccagggcatggccacgcgcatggtgatgcaggtg
cacgacgaactcgtgttcgaggtgccgcaagcggagctggagtgggtgcgccgcgaggtg
ccgcgcatcatggcgggtgtggcgacgctcaaggtgccgcttgtggccgaagtgggcgtc
ggcgccaactgggacgaggcgcactag
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