KEGG   Caldimonas aquatica: OMP39_04790
Entry
OMP39_04790       CDS       T08587                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
saqa  Caldimonas aquatica
Pathway
saqa03030  DNA replication
saqa03410  Base excision repair
saqa03420  Nucleotide excision repair
saqa03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:saqa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    OMP39_04790 (polA)
   03410 Base excision repair
    OMP39_04790 (polA)
   03420 Nucleotide excision repair
    OMP39_04790 (polA)
   03440 Homologous recombination
    OMP39_04790 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:saqa03032]
    OMP39_04790 (polA)
   03400 DNA repair and recombination proteins [BR:saqa03400]
    OMP39_04790 (polA)
Enzymes [BR:saqa01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     OMP39_04790 (polA)
DNA replication proteins [BR:saqa03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     OMP39_04790 (polA)
DNA repair and recombination proteins [BR:saqa03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     OMP39_04790 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     OMP39_04790 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc DNA_polI_exo1
Other DBs
NCBI-ProteinID: UZD55899
UniProt: A0ABY6MV89
LinkDB
Position
1059463..1062249
AA seq 928 aa
MSDNLLLLVDGSSYLYRAFHALPDLRSPDGRPTGAIYGMVGMLRKLRTQFPARYAACVFD
AKGETFRNQWYADYKAHRPPMPPALAEQIAPIHEVVRLLGWPVLEVPGVEADDVIGTLAR
LVREQGGRVIVSTGDKDLAQLVSEQVMLINTMSNESLDVEGVKAKFGVPPELIVDYLTLV
GDAVDNIPGVDKVGPKTAAKWIQEYGSLEGVIAAADKIKGVAGENLRRALDWLPQGRRLV
TVACDCDLSGHIPGWPSLEALALQDVDKPGLLAFYERHGFKTWRRELEQELAQKAGEGAG
EGALRGVPPGASADLFGVAAATPAAPSERRYDTVLDFDTLERWIARLKAAPIAALDTETD
SLDAMRARLVGISFSVEPGEAAYVPLAHGYAGAPAQLPLDEVLQRLRPWLEDERYPKLGQ
HVKYDLHVFANHGIRVKGYVHDTMLQSYVLEAHRPHNLDSLAQRHLDRRGITYEDVCGKG
AAQIPFAQVDVAKAAHYSCEDSEMALELHRKLWPRIEAEAGLRFVYERIEMPVSALLQRI
ERHGVLIDAERLQRQSQELGQRILALEAEAHELAGQPFNLGSPKQICEVLFTKLQLPVLK
KTPSGTPSTDEEVLEKLAQDYPLPAKILEHRGLSKLKGTYTDKLPQMINPATGRVHTTYA
QAVAVTGRLSSNEPNLQNIPIRTPEGRRIREAFVAPPGHFMVSADYSQIELRIMAHISGD
ANLMRAFTEGLDVHRATAAEIFNVLPQQVTSEQRRYAKVINFGLIYGMSAFGLASNLGIE
QKAARDYIDRYFQRYPDVKRYMDETRAQAKERGYVETVFGRRLWLPEINSPNGPRRSAAE
RAAINAPMQGTAADLIKLSMIAVQEALDAQGMATRMVMQVHDELVFEVPQAELEWVRREV
PRIMAGVATLKVPLVAEVGVGANWDEAH
NT seq 2787 nt   +upstreamnt  +downstreamnt
atgagcgacaacctcctgctgctggtcgacggctccagctacctctaccgtgcctttcac
gccctgccggacctgcgcagcccggacggccggcccaccggtgcgatctacgggatggtc
ggtatgttgcgcaagctgcgcacgcagtttccggcccggtacgcggcgtgcgtgttcgat
gcgaagggcgagacatttcgcaaccagtggtatgcggattacaaggcccatcgtccgccc
atgccgccggccctggccgagcagatcgccccgatccatgaagtggtgcgcctgctgggc
tggcccgtgctggaggtgccgggcgtggaggccgatgacgtgatcggcacgctggcgcgc
ctggtgcgcgagcaaggcggccgcgtgatcgtctccaccggcgacaaggacctggcgcag
ctggtgagcgagcaggtcatgctcatcaacacgatgagcaacgagtcgctcgatgtcgaa
ggcgtgaaggccaagttcggcgtgccgcccgaactcatcgtcgactacctcaccctggtg
ggcgatgcggtggacaacatccccggcgtcgacaaggtggggcccaagacggcggccaag
tggatccaggaatacggctcactggagggcgtgatcgccgcggccgacaagatcaagggc
gtggcgggcgagaacctgcggcgcgcgctggattggctgccccaggggcgccgcctggtg
acggtggcgtgcgattgcgacctgtccgggcacattccgggctggccctcgctggaggcc
ctggcgctgcaggacgtggacaagcccggcctgctcgccttctacgaacggcacggtttc
aagacctggcgcagggaactggagcaggagctggcccagaaggcgggtgagggagcgggg
gagggggcgctgcgcggcgtgccgccgggcgcaagcgccgacctgttcggcgtggcggcg
gccacgccggcggcgcccagcgagcggcgctacgacacggtgctggacttcgacacgctg
gagcgctggatcgcacggctgaaggcggcgccgatcgccgcgctggacaccgagacggac
tcgctcgatgccatgcgggcgcggctcgtcggcatttcgttcagtgtcgagccgggcgag
gccgcctatgtgccgctcgcgcacggctacgcgggggctccggctcagctgccgctggac
gaggtgttgcagcggctgcggccttggctggaggacgagcgctatcccaagctcggccag
cacgtgaagtacgacctgcacgtgttcgccaaccacggcatccgggtgaagggctacgtg
cacgacacgatgctgcagagctacgtgctcgaggcgcatcgcccgcacaacctcgacagc
ctcgcgcagcgccacctggaccggcgcggcatcacctacgaggacgtgtgcggcaagggt
gcggcgcagattccgttcgcgcaggtggacgtcgccaaggcggcccattactcctgcgag
gacagcgagatggcgctcgaactgcaccgcaagctgtggccccggatcgaggccgaggcc
gggctgcgcttcgtgtacgagcgcatcgagatgccggtgtcggcgctgctgcagcgcatc
gagcggcatggcgtgctgatcgacgccgagcgcctgcagcgccagagccaggagctgggg
caacgcatcctggcgctcgaagccgaggcgcatgagctggccggccagccgttcaacctc
ggcagccccaagcagatctgcgaggtgcttttcaccaagctgcaactgccggtgctcaag
aagacgccgagcggcacgccgtccaccgacgaggaggtgctggagaagctggcgcaggac
tatcccctgccggccaagatcctcgagcaccgcgggctgtccaagctgaagggcacttac
accgacaaactgccccagatgatcaacccggcgaccggtcgtgtgcacaccacgtatgcg
caggcggtggcggtgacgggtcgcttgtccagcaacgaacccaatctgcagaacatcccg
atccgcacgcccgaagggcggcgcatccgcgaggcgttcgtcgcgccgccggggcatttc
atggtctcggccgactactcgcagatcgagctgcgcatcatggcgcacatctcgggtgac
gcgaacctgatgcgcgccttcaccgaggggctggacgtgcaccgggcgacggccgccgag
atcttcaacgtgttgccgcagcaggtcaccagcgagcagcgccgctacgccaaggtgatc
aacttcggcctcatctacggcatgagcgccttcggcttggcgagcaatctcggcatcgag
cagaaggccgcgcgcgactacatcgatcgctatttccagcgctatccggacgtcaaacgc
tacatggacgagacgcgcgcacaagccaaggagcgcgggtatgtggagaccgtcttcggc
cggcggctgtggttgccggagatcaacagccccaacgggccgaggcgcagcgccgcggag
cgcgcggcgatcaacgcgcccatgcagggaacggcggccgacctgatcaagctgtcgatg
atcgcggtgcaggaggcgctcgacgcccagggcatggccacgcgcatggtgatgcaggtg
cacgacgaactcgtgttcgaggtgccgcaagcggagctggagtgggtgcgccgcgaggtg
ccgcgcatcatggcgggtgtggcgacgctcaaggtgccgcttgtggccgaagtgggcgtc
ggcgccaactgggacgaggcgcactag

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