Caldimonas aquatica: OMP39_04835 Help Entry OMP39_04835       CDS       T08587                                  Name (GenBank) RNA polymerase factor sigma-54   KO K03092   RNA polymerase sigma-54 factor Organism saqa  Caldimonas aquatica Pathway saqa02020   Two-component system saqa02040   Flagellar assembly Brite KEGG Orthology (KO) [BR:saqa00001]  09130 Environmental Information Processing   09132 Signal transduction    02020 Two-component system     OMP39_04835  09140 Cellular Processes   09142 Cell motility    02040 Flagellar assembly     OMP39_04835  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:saqa03021]     OMP39_04835 Transcription machinery [BR:saqa03021]  Prokaryotic type   Bacterial type    RNA polymerase     Sigma factors      OMP39_04835 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Sigma54_DBD Sigma54_CBD Sigma54_AID HTH_IclR HTH_38 Sigma70_r4_2 HTH_23 HTH_3 HTH_5 HTH_AsnC-type Sigma70_r4 LacI Motif Other DBs NCBI-ProteinID:  UZD55908 UniProt:  A0ABY6MV78 LinkDB All DBs Position 1072210..1073643 Genome browser AA seq 477 aa AA seqDB search MNSPVIRLEHRQHQTLTPRLQQAVRLLQLSSLDFAQEIQQAVGSNPFLEEDPDAHVAAEG EGPAPVEPVPSWAEVAPSAAPVSEATWDRESWGPAGGGSTRNHSGDGELDLVEMVAAEVP LRHHLHGQINVLPLSERDRALAATIIEALDDDGYLRLTLEELRGLAECSPAPDETEMNVA LKLVQSLEPAGIAARDVRECLLLQLKEIEPAQDRDLACRIVSNHLEKLAMRDINGLAKLV GATPAQVEAVCERIRHLDPRPGWRFGPSNTQFVTPDVIVRKVRGVWTATLNPDVVPKVRL NQVYAELFQRHRDSKHSELAAHLQEARWTVRNVEQRFATILNVAQAIVKRQRHFLEYGAL AMKPLGLREIAEELGLHESTVSRVTNNKYMATPLGVFELKYFFSRALPTVSGGACSATAI RGLIKDMIEAEDPSNPLSDAQIARQLARQGLAVARRTVTKYRQMLKLPSVEKRRRHS NT seq 1434 nt NT seq  +upstreamnt  +downstreamnt atgaattcaccggtcattcgactcgaacaccggcaacatcagaccctcacgccccgactg caacaggcggtgcgcctgctgcagctgtcgtcactcgacttcgctcaggagatccagcaa gccgtcggcagcaatcctttcctggaggaagacccggacgcgcacgtggcggctgaaggg gaagggcccgcgccggtcgagccggtgccgagttgggcggaagtggcccccagcgccgcc cccgtgagcgaggccacgtgggaccgcgagagctgggggcctgccggcgggggctccacc cgcaaccacagcggtgacggtgagttggatctggtcgagatggtcgcggcggaggtgccc ctgcggcaccacctgcacgggcagatcaatgtcctgccgctgtcggagcgcgaccgagcg ctggcggccaccatcatcgaggcgctcgacgacgacggctacctgcgcttgacgctggag gaactgcgaggccttgcggaatgctccccggcgccggacgagactgagatgaacgtggcc ctcaagctcgtgcagtcgctcgagccggcgggcattgccgcgcgcgacgtgcgcgagtgc ctgctgctgcaactcaaggagatcgagcccgcccaggaccgcgatctggcctgtcgcatc gtgagcaaccacctcgagaagctggcgatgcgcgacatcaacggcttggccaagctggtg ggcgccacgccggcgcaggtggaggcggtgtgcgagcgcatccgtcatctcgatccgcgc ccgggctggcggttcggcccgtccaacacgcagttcgtgaccccggacgtcatcgtgcgc aaagtgcgcggcgtctggacggccacgctcaaccccgacgtggtgcccaaggtgcggctc aaccaggtgtacgccgagctgttccagcggcaccgcgactccaagcactcggaactcgcc gcccacctgcaagaggcgcgctggacggtgcgcaacgtcgagcagcgcttcgccacgatc ctcaacgtcgcgcaagccatcgtgaagcggcagcgccacttcctcgagtacggcgcgctc gcgatgaagccgctcggcctgcgcgagatcgccgaggaactgggtctgcacgagtccacc gtctcgcgcgtgacgaacaacaagtacatggcgacgccgctgggcgtgttcgagctcaag tacttcttctcgcgcgccctgcccacggtcagcggcggggcctgctcggccaccgcgatc cgcggcctcatcaaggacatgatcgaggcggaggacccttccaaccccttgtcggacgcg cagatcgcccgccagctggcacgccagggactggcggtggcccgccgcacggtgaccaag taccgccagatgctgaagctgccgtcggtggagaagcgtcggcgccacagctga

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