Caldimonas aquatica: OMP39_05020
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Entry
OMP39_05020 CDS
T08587
Name
(GenBank) RsmB/NOP family class I SAM-dependent RNA methyltransferase
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
saqa
Caldimonas aquatica
Brite
KEGG Orthology (KO) [BR:
saqa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
saqa03009
]
OMP39_05020
Enzymes [BR:
saqa01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
OMP39_05020
Ribosome biogenesis [BR:
saqa03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
OMP39_05020
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
Ubie_methyltran
Methyltransf_31
Methyltransf_25
Methyltr_RsmF_N
MTS
Methyltransf_12
Cons_hypoth95
Methyltransf_33
TRM5-TYW2_MTfase
FtsJ
Death_3
Motif
Other DBs
NCBI-ProteinID:
UZD55944
UniProt:
A0ABY6MVD2
LinkDB
All DBs
Position
1106793..1108049
Genome browser
AA seq
418 aa
AA seq
DB search
MHPNALLDLATELLKQVLEFDAPADGVVSSFFRRHRTLGPRERHTLAETIYAVLRRRLLY
QHLAQSGSGPLERRLAILGWQGNDSFLRAALASHEQTWWEQARAVDISTLPEKLRHNLPD
WLAGALKSALGEEFWPLAESLHEPAPLDLRVNVLKAKREAVMAELAAAGVQATPTPYSPW
GLRVQGKPALQKMEIYLRGDVEVQDEGSQLLALLVGPKRGEMVVDFCAGAGGKTLALGAA
MRNTGRLYALDVSAHRLEQLKPRLARSGLSNVYPSQIAHERDERVKRLAGKVDRVLVDAP
CSGLGTLRRNPDLKWRQSPKAIEELRAKQDAILASAARLLKPGGRLVYATCSILPEENQA
VAAAFSDQHRDFVPVSAAEILEQAKVPDAQSLVDDAYLRLWPHRHATDGFFAAVWERR
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgcatccgaatgcactcctcgatctcgccaccgaactgctcaaacaggtcctcgagttc
gacgcgccggccgacggcgtcgtctcgagcttcttccgtcgccaccgcacgctcggccct
cgcgagcggcataccctggccgaaaccatctatgcggtgctgcggcggcggttgctctac
cagcacttggctcagtccggctcggggccgctggaacggcgactggccatcctcggctgg
cagggcaacgactcgttcctgcgcgccgctttggcctcgcacgagcagacgtggtgggag
caggcccgggcggtggacatctccaccttgcccgagaagctgcgccacaacctgccggac
tggctggccggcgccttgaagtcggcgctgggcgaggagttttggccactggccgagagc
ctgcacgaacccgcgccgctggacctgcgcgtcaacgtgctcaaggccaaacgcgaggcg
gtgatggccgagctggccgccgcgggcgtccaggccacgcccacgccgtactcaccctgg
ggtctgcgcgtgcaaggcaagcccgccttgcagaagatggagatctacctgcgcggcgac
gtcgaggtgcaagacgaaggcagccagttgctggccctgctcgtggggcccaagcgcggc
gagatggtggtggacttctgcgcgggcgcgggaggcaagacgctggccttgggcgctgcc
atgcgcaacacgggccggctgtacgccctcgacgtctccgcccaccgcctggagcagctc
aagccccgtctggcccgcagcggcctgtccaacgtctatccgtcccagatcgcccacgag
cgcgacgagcgtgtgaagcgcctggcgggcaaggtcgaccgcgtgctcgtggatgcaccg
tgctcgggcctgggcacgctgcgtcgcaaccccgacctcaagtggaggcagtcgccgaag
gcgatcgaggagctacgcgccaagcaggatgcgatcctcgccagcgccgcgcgactcctc
aagccaggggggcgcctggtgtatgccacttgcagcatcctgcccgaggagaaccaggcc
gtggccgccgccttctccgaccagcaccgtgatttcgtaccggtttcggcggccgagatc
ctcgagcaggcgaaagtgccggacgcgcaatcgttggtcgacgatgcttacttacgattg
tggcctcaccgtcacgccaccgacggtttttttgcggccgtgtgggaacgccgctag
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