Caldimonas aquatica: OMP39_05240
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Entry
OMP39_05240 CDS
T08587
Name
(GenBank) DUF853 domain-containing protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
saqa
Caldimonas aquatica
Brite
KEGG Orthology (KO) [BR:
saqa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
saqa03400
]
OMP39_05240
DNA repair and recombination proteins [BR:
saqa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
OMP39_05240
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HerA_C
AAA_22
DUF87
AAA_10
ResIII
FtsK_SpoIIIE
AAA_16
T2SSE
TrwB_AAD_bind
ORC-CDC6-like
AAA_30
AAA_19
AAA
AAA_7
AAA_28
nSTAND3
TraG-D_C
Motif
Other DBs
NCBI-ProteinID:
UZD55987
LinkDB
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Position
complement(1155992..1157536)
Genome browser
AA seq
514 aa
AA seq
DB search
MAEPLLIAKRGEIECHLLPGLANRHGLITGATGTGKTITLQTLAENFSRIGVPVFMADVK
GDLTGISQPGSLPPKVAKILEERGLPAPQPLACPTTLWDVFGEQGHPVRATVSDMGPLLL
GRMLALNETQQGVLSLVFKIADDQGLALLDLKDLRAMLQFAGDNASQFTTEYGNISPASV
GAIQRGLLQIEAQGGDKFFGEPMLDIADFMQTVDGRGVVNVLAADKLLNSPRLYATFLLW
MLSELFETLPEVGDLDKPKLVFFFDEAHLLFDEAPKVLIERIELVVRLVRSKGVGVYFVT
QNPLDVPDSVLGQLGNRVQHALRAFTPRDQKAVKAAAETMRANPGLDVATAITELGVGEA
LVSFLDDKGRPGITQRVYVLPPGSQIGPITPEQRRALIAGSLVAGVYEKAVDRESAYEKL
KSRAVEANASADRLAREASESIKDGMKGGAAGEAGGVLGGLGDVLFGSTGPRGGKREGVV
DALAKSAARSIGSAVGRELIRGVLGTLLGGSRRR
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atggccgagcccctcttgatcgccaagcgcggcgagatcgaatgccacctgctgcccggc
cttgccaaccggcatggcctcatcaccggcgcgaccggcaccggcaagaccatcactttg
caaacgctggccgagaacttctctcgcatcggcgtgccggtgttcatggccgacgtcaaa
ggcgacctcaccggcatctcccaaccgggcagcctgccgcccaaggtcgccaagatcctg
gaagaacgcgggctgccggcaccgcagccgctggcctgcccgacgacgctgtgggatgtg
ttcggcgagcagggccatccggtgcgcgccaccgtctcggacatggggccgctcctgctc
gggcgcatgctcgccctcaacgagacccagcagggcgtgctgtcgctcgtcttcaagatc
gccgacgaccaggggctcgcgctgctcgacctcaaggacctgcgcgcgatgctgcagttc
gccggcgacaacgccagccagttcaccaccgagtacggcaacatcagcccggcttccgtc
ggcgcgatccagcgaggcctgctgcagatcgaggcccaaggcggcgacaagttcttcggc
gagccgatgctggacatcgccgatttcatgcagacggtggacggccggggggtcgtgaac
gtgctggcggccgacaagctgctgaactcgccgcgcctgtacgccacgttcctgttgtgg
atgctctcggagctgttcgaaacgctgcccgaggtgggcgacctggacaagcccaagctc
gtcttcttcttcgacgaggcgcacctgctgttcgacgaggcgcccaaggtgctcatcgag
cgcatcgaactggtggtgcggctggtgcgatccaagggcgtgggggtgtacttcgtgacg
cagaacccgctggacgtgcccgacagtgtgctgggtcaactgggcaatcgcgtgcagcac
gcgctgcgcgccttcacgccccgcgaccagaaggcggtcaaggccgccgccgagacgatg
cgcgccaacccgggcctggacgtcgcgaccgcgatcaccgagctgggcgtcggcgaggcg
ttggtcagcttcctcgacgacaagggccgaccgggcatcacgcaacgcgtgtacgtgctg
ccaccgggcagccagatcggcccgatcacgcccgagcagcgccgcgccctcatcgccggc
tcgctggtggcgggcgtgtacgagaaggcggtggaccgcgaatcggcctacgagaagctc
aagagccgcgcggtggaggccaacgcctcggcggaccggctggcccgcgaagcgagcgag
tcgatcaaggacggcatgaaaggcggcgcggcaggtgaggccggcggcgtgctcgggggc
ctgggcgacgtgctcttcggctccaccggccctcgaggcggcaagcgcgaaggcgtggtc
gatgcgctggccaagtcggctgctcgatccatcggcagcgcggtgggccgcgagctgatc
cgcggcgtgctgggcaccctgctgggcggcagccgccgccgctga
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