Caldimonas aquatica: OMP39_07080
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Entry
OMP39_07080 CDS
T08587
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
saqa
Caldimonas aquatica
Brite
KEGG Orthology (KO) [BR:
saqa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
saqa03016
]
OMP39_07080 (truB)
Enzymes [BR:
saqa01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
OMP39_07080 (truB)
Transfer RNA biogenesis [BR:
saqa03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
OMP39_07080 (truB)
Prokaryotic type
OMP39_07080 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
UZD56321
UniProt:
A0ABY6MWD1
LinkDB
All DBs
Position
1575061..1576026
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AA seq
321 aa
AA seq
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MHVRAPSVAPAPGRRPKRVVHGVLLLDKPLGLSSNDALQRVRRLLRAEKAGHAGTLDPLA
TGLLPLCFGAATKFAQLGLEADKGYRAVMQLGVTTTTGDAEGEVLRTRPVQLTLEKIEAA
IRQFLGPIEQVPPMHSALKRDGKALYEYARAGLEVEREARRVTIHALRLVDWNGERLEIE
VRCSKGTYVRTLAQDIGEALGCGAHLVALRRISSGALGLEGAVALVTLEDAGADAIEARM
LPVDALVADRPVVRLSAEETGRFLSGMRRKIDHPDDELVRVYGPQPAAFLGTARVKAGDL
IPLRLLSPVEVEAILHTRTSR
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
gtgcacgttcgcgctccttccgtcgcgcccgctcccggccgccgccccaagcgggtggtt
catggcgtcctgctcctcgacaagcccctgggcctgtcgagcaacgacgcgttgcagcgc
gtgcgtcgcctcctgcgcgccgagaaggcgggccatgccggaaccttggatccgttggcc
acgggcttgctgccgttgtgcttcggtgcagcgaccaagttcgcgcagctcgggctggag
gccgacaaggggtaccgggcggtcatgcagctgggcgtgacgacgaccacgggggacgcc
gaaggcgaagtgctgcgcacccggccggtgcaactcaccctcgagaagatcgaggcggcg
atcaggcagttcctcggtccgatcgagcaagtgcccccgatgcattcggccctcaaacgc
gatggcaaagcgctctacgagtacgcgcgcgccgggctggaggtcgaacgggaggcccgc
cgtgtcacgatccacgcgctgcggctggtggactggaacggcgagcggctcgagatcgag
gtgcgctgcagcaaaggcacctacgtgcgcacgctcgcgcaagacatcggcgaggcgctg
ggctgcggcgcgcacctcgtggcgctcaggcgcatttccagtggggcgttgggcctcgag
ggggccgtggcgctcgtcactctcgaggacgccggcgccgacgccatcgaagcgcggatg
ctgcccgtggacgcgctggtggccgatcggcccgtcgtgcgcctgagcgccgaggagacg
gggcgctttctcagcggcatgcgccgcaagatcgaccatccggacgacgagctcgtccgg
gtgtacggaccgcagccggcggcgttcctcggcaccgctcgcgtgaaggcgggcgatctg
atcccgctgcgccttttgagtcccgtggaggtggaagccatcctccacacccgaacgagc
cggtga
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