Caldimonas aquatica: OMP39_08040
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Entry
OMP39_08040 CDS
T08587
Symbol
smc
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
saqa
Caldimonas aquatica
Brite
KEGG Orthology (KO) [BR:
saqa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
saqa03036
]
OMP39_08040 (smc)
Chromosome and associated proteins [BR:
saqa03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
OMP39_08040 (smc)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_21
AAA_23
SMC_hinge
AAA_15
AAA_29
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
UZD53654
LinkDB
All DBs
Position
complement(1776075..1779590)
Genome browser
AA seq
1171 aa
AA seq
DB search
MRLNSIKLSGFKSFAEPTHFQLPGQLVGVVGPNGCGKSNIMDAVRWVLGESKASELRGES
MQDVIFNGSGNRKPASRASVELVFDNSDGRAGGQWNQFTEIAVKRVLTRDGTSSYFINNQ
PVRRRDVQDVFLGTGLGPRAYAIIGQGTISRIIESKPEELRMFLEEAAGVSKYKERRRET
ENRLKDTRENLTRVEDILRELNANLDKLEKQAEVAAQYRSLQEQGTLKLHQLWFLKHRDA
AGEEERVRREVLEATNALESRLAELRHVEAELETIRQAHYTASDELHAAQASLAEANLEV
SRLEERIRYVVEGRQRAEQRLRELQTQSEQWADRRAQAESELDTIAEQIAMAEEQAEVLA
AQAEEQAGNLPTYEDAVRAASQKANEQRNAVAGIQQQIQLLAAESRSIDEQSRQLQMRRE
RLTAEAKGLAAPDDARLAELHRQHEQAAEAQAVAEERLHELTELVPQLDEDRRAKQERVN
AETAKQADSSARLEALRALQEKVQTEGKLKPWLAKHGLEGLHGLWTRVHIEPGWETALES
ALRERLNALEVGRVETVRAFASDAPPAKLAFYTLPAAAIVNTHHTLPRLSDLLRLNDAGL
KALLNDWLEGVYTAASLDEALAQRSKLTHGEVIMTREGHAVSQFAVSFYAPDSEQAGMLQ
RAQEIENLERQVKAQALIAEEARSALVRAEAAYTEASQRLVTARREAAELQARTHQLQVE
LLRLTQQAEQTSSRRGQIDAELAEIDAQLEELNERRATGEARFEELDMALANEQERHAQL
EEAVIDAERRLNEAREQLRSLEREAQEAQFSARALAARRGELQRSIETALQQIQANEQSV
EQLRAELDSFNDQAAQAGLQEALALKMEREAALAAKRSEYDDLSAKLRRAEEQRMEFERS
LQPLRDRITKLQLEEQAAALGGAQYMEQLTAAQVDLEALARSIEEGNVKLYGLQGEIDRI
NREIAALGAVNLAALDELSAARERKTFLDSQSADLNDAIKTLEDAIHKIDLETRDLLKKT
FDTVNEHFGRMFPSLFGGGNAKLVMTGDEILDAGVQVMAQPPGKKNSTIHLLSGGEKALT
AIALVFAIFQLNPAPFCLLDEVDAPLDDANTERYANLVKSMSKSTQFLFISHNKIAMEMA
EQLVGVTMQEQGVSRIVAVDMEAAIGMAEAA
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctgaattcgatcaagctgtcaggcttcaagtcgtttgccgagcccacgcacttc
cagttgcccggccagctcgtcggcgtcgtgggccccaacgggtgcggcaagtcgaacatc
atggacgcggtgcgctgggtgctgggcgagtccaaggcctccgagctgcgcggcgagtcg
atgcaggacgtgatcttcaacggctcgggcaaccgcaagccggccagccgcgccagcgtc
gagctcgtgttcgacaactccgacggccgtgccggcgggcagtggaaccagttcaccgag
atcgccgtcaagcgggtgctcacgcgcgacggcacctccagctacttcatcaacaaccag
ccggtgcgccggcgcgacgtgcaggacgtgttcctcggcacgggtctggggccgcgcgcc
tacgccatcatcggtcagggcacgatcagccgcatcatcgaatccaagcccgaggagctg
cgcatgttcctcgaggaggcggccggcgtgtccaagtacaaggagcgccgtcgcgagacc
gagaaccggctgaaggacacgcgcgagaacctcacgcgggtggaagacatcctgcgcgag
ctcaacgccaacctcgacaagctcgagaagcaggccgaggtggcggcgcaataccgcagc
ctgcaggagcagggcacgctcaagctgcatcagctgtggttcctgaagcaccgcgatgcg
gcgggcgaggaagagcgggtgcgccgcgaggtgctcgaggccaccaacgccctggagtcg
cgcctggcggagctgcgccacgtggaggccgagctggagacgatccggcaggcgcactac
accgcgagcgacgaactgcacgcggcgcaggcgtcactggccgaggcgaacctcgaagtg
agccggctcgaggagcgcatccgctatgtcgtcgaaggacgccagcgtgccgagcagcgc
ctgcgcgagttgcagacgcaaagcgagcagtgggccgatcgccgcgcccaggccgagtcg
gaactcgacaccatcgccgagcagatcgcgatggccgaggagcaggccgaggtgctggcc
gcccaagccgaggaacaggccggcaatctgccgacctacgaggacgcggtgcgcgccgcg
agccagaaggccaacgagcagcgcaacgccgtcgccggcatccagcagcagatccagttg
ctggccgccgagtcgcgcagcatcgacgagcagtcgcgccagttgcagatgcggcgcgag
cgcctgacggccgaggccaaggggctggccgcgccggacgatgcacggctggccgagttg
caccgccagcacgagcaggccgccgaggcgcaggcggtggcggaggagcggctgcacgag
ctgaccgaactcgtgccccagctggacgaggaccgccgtgccaagcaggagcgcgtcaac
gccgagacggccaagcaggcggactcgagcgcgcggctggaggccctgcgggcgctgcaa
gagaaggtgcagaccgagggcaagctcaagccctggctcgccaagcacgggctggagggc
ttgcatgggctgtggacgcgggtgcacatcgagccgggctgggagacggcgctggagtcg
gccctgcgcgagcgtctgaacgccctcgaggtggggcgggtcgagacggtccgggccttc
gcctcggacgccccgcccgccaagctcgccttctacacgctgccggccgcggccatcgtc
aacacccatcacacgctgccgcgcctgtcggaccttctgcgcctgaacgatgccgggctc
aaggccctgctcaacgactggctggaaggcgtgtacaccgcggcctcgctcgacgaggcg
ctcgcccagcgcagcaagctgacgcacggggaggtgatcatgacccgcgagggtcatgcg
gtgtcgcagttcgccgtgagcttctacgcgcccgacagcgaacaggcaggcatgctgcag
cgcgcccaggagatcgagaacctcgaacgccaggtcaaggcgcaggccctcatcgccgag
gaggcccgctcggccctggtgcgcgcggaggcggcctacaccgaggcgtcgcagcgcctc
gtcaccgcgcggcgcgaagcggccgagttgcaggcacgtacccatcagttgcaggtggag
ttgctgcggctgacgcagcaggccgagcagacgagcagccggcgcgggcagatcgacgcc
gagctggccgagatcgatgcccagctcgaggagctcaacgagcgccgtgccaccggcgag
gcgcgcttcgaagagctggacatggcgctggccaacgagcaggagcggcacgcccagctc
gaggaggccgtgatcgacgccgagcggcggctcaatgaagcgcgcgagcagttgcgctcg
ctggagcgcgaggcgcaggaggcgcagttctcggcccgggcgctggcggctcgccggggc
gagttgcagcgctccatcgagacggcgctgcaacagatccaggccaacgagcagagcgtc
gaacagttgcgtgccgagctggacagcttcaacgaccaggccgcccaggccggcctgcag
gaggcgctggcgctgaagatggagcgcgaggcggcccttgcagccaagcgcagcgagtac
gacgacctctcggccaagctgcgccgcgccgaagagcagcgcatggagttcgagcgcagc
ttgcagccgctgcgcgaccgcatcaccaagctgcaactggaagaacaggccgcggccctg
gggggcgcccaatacatggagcagctcaccgccgcgcaggtggacctggaggccctggcg
cgcagcatcgaggaaggcaacgtcaagctctacggcctgcagggtgagatcgaccgcatc
aaccgggagatcgcggcactcggcgcggtcaacctcgccgcgctcgacgaactgtcggcc
gcgcgcgagcgcaagacctttctcgactcgcagtcggccgacctcaacgacgccatcaag
acgctggaagacgcgattcacaagatcgacctggaaacgcgcgacctgctcaagaagacg
ttcgacacggtaaacgagcacttcggccgcatgttccccagcctgttcggcgggggcaac
gccaagctggtgatgacgggcgacgaaatcctggacgccggcgtgcaggtgatggctcag
ccgccgggcaagaagaactccaccatccatctcctgtcgggcggcgagaaggcgctcacg
gcgatcgcgctcgtgttcgcgatcttccagctcaacccggcgccgttctgcctgctcgac
gaggtcgacgcgcccctggacgacgccaacaccgagcgttatgccaacctggtcaagagc
atgtccaagagcacgcagttcctgttcatctcgcacaacaagatcgcgatggagatggcc
gagcaactggtcggggtgacgatgcaggagcagggggtctcgcgcatcgtcgcggtcgac
atggaagccgccatcggcatggccgaggccgcctga
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integrated database retrieval system
