Caldimonas aquatica: OMP39_08195
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Entry
OMP39_08195 CDS
T08587
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
saqa
Caldimonas aquatica
Brite
KEGG Orthology (KO) [BR:
saqa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
saqa03009
]
OMP39_08195 (rimO)
Enzymes [BR:
saqa01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
OMP39_08195 (rimO)
Ribosome biogenesis [BR:
saqa03009
]
Prokaryotic type
ribosomal protein modification factors
OMP39_08195 (rimO)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
CLP1_P
YajR_YAM
Methyltransf_2
Motif
Other DBs
NCBI-ProteinID:
UZD53684
UniProt:
A0ABY6MMM1
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All DBs
Position
complement(1812237..1813649)
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AA seq
470 aa
AA seq
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MSSTSYDTPTVAQLPGDGAAAPRIGFVSLGCPKALTDSELILTQLRAEGYETSKTFQGAD
LVIVNTCGFIDDAVKESLDTIGEALAENGKVIVTGCLGARTGESGENLVRQVHPKVLAVT
GPHATQEVMDAVHRHVPKPHDPFVDLVPPTGVKLTPKHYAYLKISEGCNHRCTFCIIPSM
RGDLVSRPIGEVLGEAQRLLEAGVKELLVISQDTSAYGVDVKYRTGFWNGRPVRTRMLDL
VHALGDLAERHGAWVRLHYVYPYPHVDEIVPLMAEGKVLPYLDVPFQHAHPDVLKRMKRP
ADGEKNLERIQRWREICPEIVIRSTFIAGFPGETEAEFQYLLDFMREAQIDRAGCFAYSP
VRGAAANGLPGALPDEVREERRARFMAVAEAVSTARLQRRVGATMQVLVDSAPALGRKGG
VGRSYADAPEIDGVVKLLPPEKASKTLKVGEFTKARIVAAEGHDLIAVPV
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcgacctcctacgacactccgacggtcgcccagttgcccggcgacggggctgcc
gcaccccgtatcggcttcgtcagcctgggctgcccgaaggcgctcaccgactccgagctg
atcctcacccagctgcgtgcagaaggctacgagacgtccaagaccttccagggtgcggat
ctcgtcatcgtcaacacctgcggcttcatcgacgacgcggtgaaggaaagcctcgacacc
atcggcgaggcactggccgagaacggaaaggtcatcgtcacggggtgcctgggcgccagg
acgggtgagagcggcgagaacctcgttcgccaggtgcaccccaaggttttggccgtcacc
ggcccgcacgccacgcaggaggtgatggacgccgtccaccggcacgtgcccaagccgcat
gatccgttcgtggacctggtgcccccgaccggcgtgaagctcacgcccaagcactatgcc
tatctcaagatcagcgagggctgcaaccaccgctgcaccttctgcatcatcccctcgatg
cggggcgatctggtctcgcggcccatcggcgaggtgctgggcgaggcgcagcggctcttg
gaggcgggcgtcaaggagctgctcgtcatcagccaggacaccagcgcctacggcgtggac
gtgaagtaccgcaccgggttctggaacggccggccggtgcgcacgcggatgctggatctg
gtccatgctctgggcgatctggccgagcgccatggtgcctgggtgcggctgcactacgtc
tacccgtacccccatgtcgacgagatcgtccccctgatggccgaaggcaaggtgctgccg
tatctggacgttccgttccagcacgctcaccccgacgtgctcaagcggatgaagcgtccc
gccgacggcgagaagaacctcgaacgcattcagcgctggcgggagatctgccccgagatc
gtcatccgcagcaccttcatcgccggcttccccggcgaaaccgaagccgagttccagtac
ctgctcgatttcatgcgcgaggcccagatcgaccgcgccggctgcttcgcttactcgccg
gtgcgaggcgctgccgccaacggcctgccgggtgcactgcccgacgaggtgcgcgaggag
cgcagggcgcgtttcatggcggtggccgaggcggtttcgaccgccaggctccagcgccgg
gtcggcgccacgatgcaggtgctggtcgattccgcaccggccttgggccgcaagggcggg
gtggggcgcagctacgccgatgcaccggagatcgacggggtcgtgaagctcctgccgccg
gagaaggcgtccaagaccttgaaggtcggcgagttcaccaaggcccgcatcgtcgccgcc
gagggccacgacctgatcgccgtgccggtgtga
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