Caldimonas aquatica: OMP39_08870
Help
Entry
OMP39_08870 CDS
T08587
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
saqa
Caldimonas aquatica
Pathway
saqa03030
DNA replication
saqa03430
Mismatch repair
saqa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
saqa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
OMP39_08870 (dnaX)
03430 Mismatch repair
OMP39_08870 (dnaX)
03440 Homologous recombination
OMP39_08870 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
saqa03032
]
OMP39_08870 (dnaX)
03400 DNA repair and recombination proteins [BR:
saqa03400
]
OMP39_08870 (dnaX)
Enzymes [BR:
saqa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
OMP39_08870 (dnaX)
DNA replication proteins [BR:
saqa03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
OMP39_08870 (dnaX)
DNA repair and recombination proteins [BR:
saqa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
OMP39_08870 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
DNA_pol3_gamma3
DNA_pol3_tau_5
AAA
RuvB_N
AAA_22
DUF3646
AAA_18
AAA_14
AAA_16
Rad17
TsaE
Herpes_Helicase
nSTAND3
AAA_2
AAA_assoc_2
SKI
AAA_28
Motif
Other DBs
NCBI-ProteinID:
UZD53807
LinkDB
All DBs
Position
complement(1963804..1965858)
Genome browser
AA seq
684 aa
AA seq
DB search
MSYLVLARKYRPRTFEQMVGQEHVVQALANALTQQRLHHAYLFTGTRGVGKTTVSRILAK
SLNCVGPDGQGGITPTPCGQCEACREIDAGRFVDYVELDAASNRGVEEISQLLDQAIYKP
VVGRFKVYMIDEVHMLSNTAFNAMLKTLEEPPEYLKFVLATTDPQKVPVTVLSRCLQFNL
RPMAPETVCEHLMRVLQAEAIEADPAAVRLLARAARGSMRDALSLTDQAIAFGSGRLEEA
SVRQMLGAVDRSHVYRLLEALAARDGRTVVATAEELRARGLSAAGALEEMATVLQEIAVA
QVVPECVSPDDPEASSVTRLAAALPAEETQLLYSMALHGRNELGLAPDEYSGLTMALLRM
LAFRPADSGPVRSQALQRPPAATTRVPVAPPRAAAAQAQRRGAGEPAVPARAAPTPVLEP
SSSPLGADTSPGAAVTRPVAPALQSGSQRSAGDVCPRPPSAAGAVPPSARERAPATARIE
DDLPPWLDAPVADEHEPAQPLPQVAPQAHSSAVARHIAVAPVADAAPSQEAEPRSATDSH
VSKGPTATGAVAPSVHGDRWHACVRQLCERELVAALVRELAMQSELVEVDDAQTHFHLRV
ERGTLAAEGTRAKLEAALTQLLGHAVRLQVEVAPTSDTPARREAAQREARQRAAEEALRN
DPLVVSLLQQFATARIVPGSVKPL
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgagctacctcgttcttgcccgcaagtaccggcctcgcaccttcgagcagatggtgggg
caagagcatgtggtgcaggcgctcgccaatgcgctcacgcagcagcggctgcaccatgct
tatctcttcacgggcacgcgtggcgtgggcaagacgaccgtctcgcgcatcctcgccaag
tccctcaattgcgtcggcccggacgggcagggcggcatcaccccgacgccttgcggccag
tgcgaggcgtgccgcgagatcgacgccggccgcttcgtcgactacgtcgagctcgacgcc
gcctccaaccggggggtcgaggagatctcccagctgctggatcaggcgatctacaagccg
gtcgtcggccgcttcaaggtctacatgatcgacgaggtccacatgctgtccaacaccgcg
ttcaacgcgatgttgaagacgctggaggagcctccggagtacctcaagttcgtgctcgcg
accaccgacccccagaaggtgccggtcacggtgttgtcgcgctgcctgcagttcaacctg
cggcccatggcgcccgagacggtgtgcgagcacctgatgcgtgtgctgcaggcggaggcc
atcgaggccgaccccgcggccgtgcgcttgctggcgcgtgcagcgcgcggctcgatgcgc
gatgcgctgtcgctcaccgaccaggcgatcgccttcggctcgggccggctggaggaggcc
agcgtgcgccagatgctgggcgccgtcgaccgctcgcacgtctaccggttgctcgaggcg
cttgccgcgcgtgacgggcgcaccgtcgtggcgacggccgaggaactgcgcgcgcgcggg
ctctcggcggcgggcgccctggaggaaatggccacggtcctgcaggagatcgccgtcgca
caggtcgtgccggagtgtgtttcgcccgacgacccggaggcctccagcgtcacccggttg
gccgccgccttgccggcggaggagacgcagctgctctacagcatggccttgcacggccgc
aacgaactcggcttggcgccggacgaatacagcgggctgacgatggcgctgctgcgcatg
ttggcctttcgtcctgcggactccggtccggtgcgttcccaggcgttgcagcggcccccg
gcggccaccaccagggtgccggtggcgccgcctcgtgcggcagcggcccaggcgcagcgc
cggggcgcgggtgagcccgccgtgccggcgcgggccgccccgacgccggtgctggagccg
tcttcttcacccctcggcgccgatacgtccccgggagcggctgtcacgcggccggtcgcg
ccggccctgcagtccgggtcccagcgctctgcgggcgatgtgtgcccgcggccaccgagc
gccgcaggcgccgtccccccctcggcccgcgagcgcgcacctgcgacggcccggatcgaa
gacgatctcccgccctggctcgacgcgccggtggccgacgagcacgagcccgcgcagccg
ctcccccaggttgcgccacaggcgcattcctccgccgtcgctcggcatatcgccgtcgcc
cctgtggcagacgctgcgccttcgcaggaggccgaaccgaggagcgccaccgattcgcac
gtgtcgaagggcccgactgcgaccggcgcggtggctccctcggtgcacggcgatcgatgg
catgcctgcgtgcggcagttgtgcgagcgcgaactcgtcgccgccctggtgcgcgaactg
gcgatgcagtctgagctggtcgaggtggatgacgcgcagacccacttccacctgcgggtg
gaacgcggcacgctcgctgccgagggcacacgcgcgaagctggaggccgcgctgacgcag
ctgctgggccacgcggtccggcttcaggtggaggtggccccgacctccgacacccccgcc
cggcgcgaggcggcacagcgcgaggcgcgccagcgcgcggccgaggaggcgctgcgcaac
gatccgctggtggtgagccttctgcagcagttcgccacggcgcgcatcgtgcccggctcg
gtcaaaccgctgtga
DBGET
integrated database retrieval system
