Caldimonas aquatica: OMP39_09340
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Entry
OMP39_09340 CDS
T08587
Name
(GenBank) PAS domain S-box protein
Organism
saqa
Caldimonas aquatica
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_4
PAS_9
PAS
PAS_3
HATPase_c
Response_reg
HisKA
PAS_8
PAS_7
GAF
GAF_2
PhaC_N
GAF_3
Motif
Other DBs
NCBI-ProteinID:
UZD53896
LinkDB
All DBs
Position
2061956..2065942
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AA seq
1328 aa
AA seq
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MSTAAPDAVAKRTDLLRELRILDTSPEPCFDSAVALAQQLTGFPLAWLALVDGERMWLKA
SVGLRRQELPCAGGWCTPVLASPGPLAVESLRAYDVTPHTAVIWEAEGVDGYAAVPIRVE
GRALGLLAVADHVPRLAPAAALAGLEHVARLVGELLEGRLKAQRSRLQEARVRTASRAGS
DWLWETDAEGRVTWASETIETHIGLRPQEEIGRKPSEILLRREDPEHDASWQAYLAARAR
REPFHNLVADRITPRGRVTVSISGIPVFDSAGRFRGYRGATRIITHELEAQARARHAQQL
LQHAIESMSASVAITDERGLVVHANRTWRDRNGRYLDPANPSWEAALRRMVEAGEFPDAV
GREAEFLAQWAAAEHQATPREVRRRDQWLLVTSQRLEHGGAIHVGVDITARKQSELELAY
RQAELRASEARMAAVLQALPDLWFVMDAQGRYLRGGDTARHLLAAPFEQVMGRSVHEVLP
SDTAQRIEAALRAALDTGAVQRVEYELTPMGSERVRTFEGRFVRMTHDQVLLIVRDLTEL
RSMERDLHIMLRAIEAEASLPISVVDAEAPDQPVVYVNPAFERLTGYSREEVLGRNCRIL
QGLDRDQGALEPLRAALREGRSTTVVLRNYRKDGTRFINEVHVAPVHAADGRITHFIGVQ
TDITERSVAADRLRLSEELYRSVALSISDGLMVVTTGSYVVAVNPAACRILDMAMEDLVM
SPGLELLDESLEPLPAEDHPVTRTLESGEPTTERVYGVKLSDGRVRWLHLGVQPLRIAPH
DRPLSAVVTFRDITRQREAEQALAVSEQRWKFALEGSGNGVWDWDVASDRVFYSTRWKEI
LGYLDHELGSSVEVWSSRVHPDDRAAVLERLQAHLRGESAVYQSEHRIRHREGHHLWVSE
RGKAVLRDTDGRALRIVGTLADITPQKEAEQALRDKQAAELASRSKTEFLSRMSHEMRTP
LNAMIGFSQLLKLGARGPGAEQVRDYADHMLQAGQHLLALINDVLDLQRVEAGQLPMTPG
AVSLRHSLTQVIDLLKPAAESALVHFRLEVPAAVHVWADAQRLRQVLINIVSNAVKYNRP
GGDVTLTLERPREDPARGERVVLRVEDNGEGLDAGQLARLFQPFERLGRETSSIEGTGLG
LVIAKRLLQEMEGSIAVTSTPGQGTQVRIELPAASAQTQLEPPARPSGEVVAELGAPRPL
RMLYVEDNPINALLFEEAMKLAGHVELRIAEDGPRALEIVREWLPDILVLDAHLPGMDGI
QVLKALRNHEGLAEAPAFMCSADAMPEDIQRALDAGFQGYWTKPIEVSRVLAEVRRIAAR
SSLPQSSL
NT seq
3987 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccgccgcccctgacgcagtcgccaaacgcacggatctgttgcgcgagttgcgc
atcctggacacgtcccccgagccttgcttcgactcggccgtggcactggcgcagcagctc
acgggcttcccgctcgcgtggctcgccctcgtcgacggcgagcgcatgtggttgaaggcc
agcgtcgggttgcgtcggcaggagctgccgtgcgcgggtggctggtgcacgccggtgctc
gcatccccgggcccgctcgccgtggagtcgctgcgggcgtacgacgtcacgccgcacacc
gccgtgatctgggaagccgaaggggtggacggctacgccgcggtaccgatccgcgtggag
ggacgggccctcggcctcctcgccgtcgccgatcatgtgccccggctggcgcccgcggcc
gcactggccggcctcgagcacgtggcccgactggtcggcgagctgttggaaggccggctc
aaggcacagcgttctcggctgcaggaagcgcgcgtgcgcacggccagccgtgcaggcagc
gactggctgtgggagaccgacgccgaaggccgcgtcacgtgggcgtcggagacgatcgaa
acccacatcggtctgcggccccaggaggaaatcggccgcaagccctccgagattctcctg
cgccgcgaagaccccgagcacgatgcgtcttggcaggcctacctggccgcgagggcccga
cgcgaaccttttcacaacctcgtcgccgaccgcatcacgcctcgcggacgggtgacggtg
tcgatcagcggcatcccggtcttcgactccgcaggccgcttccggggctatcggggcgcc
acgcgcatcatcacgcacgaactggaggcccaggcgcgtgcgcgtcatgcgcagcaactg
ctgcagcacgcgatcgagagcatgagcgcgtcggtggcgatcaccgatgagcggggcctg
gtcgtccatgcgaaccgcacctggcgggatcgcaacggccgctacctggatccggcaaac
ccctcctgggaagccgcgctgcgccgcatggtggaggccggcgagttccccgacgcggtg
ggacgcgaagcggagtttctcgcccagtgggccgccgccgagcaccaggcgacgccgcgc
gaagtccgccgacgcgaccaatggctgctggtcacctcgcaacgcctcgagcatggcggg
gcgatccatgtgggcgtcgacatcacggcccgcaagcagtccgagctcgaactcgcgtac
cggcaggcggagttgcgtgcctccgaggcgcgcatggccgccgtcttgcaagccttgccc
gacctgtggttcgtgatggatgcgcagggccggtacctgcgtggcggcgacacggcgcgg
cacctgcttgccgcaccgttcgagcaggtgatgggccgctcggtgcacgaagtccttccc
tcggacacggcgcagcgcatcgaggctgcgttgcgcgcggcgctggacaccggcgccgtg
cagcgcgtcgagtacgaactcacgccgatgggctcggagcgcgtgcgcacgttcgaaggc
cggttcgtgcgcatgacccacgaccaggtgctgctcatcgtgcgcgacctgaccgagctg
cgcagcatggagcgcgacctgcacatcatgctgcgtgcgatcgaggcggaagcctcgttg
cccatctcggtggtggacgccgaggcgcccgatcagccggtcgtctacgtcaatcccgcc
ttcgagcgcctgaccggctacagccgcgaagaggtgctgggccgcaactgccgcattctg
cagggactggaccgcgatcagggcgccctggaacccttgcgggctgccttgcgggagggg
cgatccaccaccgtggtgctgcgaaactaccgcaaggacggcacccgcttcatcaacgag
gtgcacgtcgcgccggtccatgcggccgacggtcgcatcacgcacttcatcggcgtgcag
acggacatcaccgagcgcagcgtggcggccgatcgcctgcggctgagcgaggagctgtac
cgctcggtggcgctgtcgatcagcgacggactcatggtcgtcaccaccggttcgtacgtg
gtcgccgtgaacccggcggcctgccgcatcctcgacatggcgatggaagatctcgtcatg
tcgcccggcctggagttgttggacgaatcgctggagccgttgccggccgaggaccatccg
gtgacccgcacgttggaaagcggcgagccgacgaccgagcgggtctatggcgtgaagctg
tccgacggacgcgtgcggtggctgcacctgggcgtgcaaccgctgcgcatcgcgccgcac
gacaggccgctgtcggccgtggtgaccttccgcgacatcacccggcagcgcgaggccgaa
caggctcttgccgtgagcgagcagcgctggaagttcgcgctggagggcagcggcaacggg
gtgtgggactgggacgtcgcgtccgatcgcgtcttctactcgacccgctggaaggagatc
ctcggctacctggatcatgaactgggcagctccgtggaggtgtggtcctcccgcgtccac
cccgacgaccgggcggcggtgctcgagcgtctgcaggcccacctgcgtggggaatcggcg
gtctaccagtccgagcaccgcatccgtcaccgggagggccaccatctctgggtgtccgag
cgcggcaaggccgtgctgcgcgacaccgacggacgtgccttgcgcatcgtcggcactctg
gccgacatcaccccgcagaaggaagccgagcaggcgctgcgggacaagcaggccgcggag
ctcgcgagccggtcgaagaccgagttcctctcgcggatgagccacgagatgcgcacgccg
ctcaatgcgatgatcggcttttctcagttgctcaagctcggtgcgcgtggccccggcgcc
gagcaggtgcgcgactacgccgaccacatgctgcaagccggccagcacctgctcgcgctc
atcaacgatgtgctggacctgcagcgcgtggaggcggggcaattgccgatgacgcccggg
gccgtgagtctgcgtcactcgctgacgcaggtcatcgacctgctcaagcccgccgcagag
tcggccctggtgcatttccgcctggaggtgccggccgcggttcacgtttgggccgatgca
cagcggctgcggcaggtgctgatcaacatcgtgtccaacgccgtgaagtacaaccggccg
ggcggcgatgtgacgctcacgctcgagcggcctcgcgaggacccggctcgcggcgagcgc
gtggtgctgcgcgtggaggacaacggcgagggactcgacgcggggcagctcgcacggctg
ttccagccgttcgagcggctcggccgcgagacgtcctcgatcgagggcaccggcctcgga
ctcgtcatcgccaagcgcctgctccaggaaatggaaggatctattgccgtgaccagcacg
cccggacagggcacgcaagtgcgcatcgaattgccggcagccagcgcccagacccagctc
gagcctcccgcccggccgagcggcgaggtcgtggccgagctcggcgctccccggcccctg
aggatgttgtacgtggaggacaacccgatcaacgccctgctcttcgaggaggcgatgaag
ctggccggccacgtggaactgcgcatcgccgaggacgggccgcgcgccctcgagatcgtg
cgcgagtggttgcccgacatcctggtgctcgacgcgcacttgccgggcatggatggcatc
caggtgctcaaggccttgcgcaaccacgagggtctggccgaggcaccggcgttcatgtgc
tcggccgacgccatgcccgaagacatccagcgagccctcgatgccggcttccagggctat
tggacgaagccgatcgaagtctcgcgcgtgctggccgaagtgcgccgcatcgccgcgcgc
agctcgctgccgcaatcctctctttga
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