Caldimonas aquatica: OMP39_10360
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Entry
OMP39_10360 CDS
T08587
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
saqa
Caldimonas aquatica
Pathway
saqa00260
Glycine, serine and threonine metabolism
saqa00460
Cyanoamino acid metabolism
saqa00630
Glyoxylate and dicarboxylate metabolism
saqa00670
One carbon pool by folate
saqa00680
Methane metabolism
saqa01100
Metabolic pathways
saqa01110
Biosynthesis of secondary metabolites
saqa01120
Microbial metabolism in diverse environments
saqa01200
Carbon metabolism
saqa01230
Biosynthesis of amino acids
saqa01240
Biosynthesis of cofactors
saqa04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
saqa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
OMP39_10360
09102 Energy metabolism
00680 Methane metabolism
OMP39_10360
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
OMP39_10360
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
OMP39_10360
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
OMP39_10360
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
OMP39_10360
Enzymes [BR:
saqa01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
OMP39_10360
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
Cys_Met_Meta_PP
PDH_C
Motif
Other DBs
NCBI-ProteinID:
UZD54080
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Position
2283797..2285044
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AA seq
415 aa
AA seq
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MFDRTVSTIANVDPELWAAIQQENQRQEEHIELIASENYASPAVMAAQGSQLTNKYAEGY
PGKRYYGGCEYVDIVEQLAIDRLKALFGAEHANVQPNSGSQANQGVFFALLQPGDTIMGM
SLAEGGHLTHGMPLNMSGKWFKVVSYGLNDKEEIDYDAMERLAHEHKPKLIIAGASAYSL
RIDFERFARVAKAVGAYFMVDMAHYAGLIAGGVYPNPVPFADVVTSTTHKSLRGPRGGII
LMKDHVAKQINSAIFPGIQGGPLMHVIAAKAVAFKEALTPEFKAYQQQVVKNAQALAETL
VSRGLRIVSGRTESHVMLVDLRAKGITGKEAEAVLGQAHITCNKNAIPNDPEKPMVTSGI
RLGSPAMTTRGFKEAEAVQTAHLIADVLDHPRDEATIARVRAQVHELTRRFPVYG
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaccgcaccgtttccaccatcgccaacgtcgatcccgaactctgggccgccatc
cagcaggaaaaccagcgccaggaagagcacatcgagctgatcgcgtccgagaactacgcc
tccccggccgtgatggcggcgcagggctcgcagctgaccaacaagtacgccgagggctac
cccggcaaacgctactacggcggctgcgagtacgtggacatcgtcgaacaactggcgatc
gaccgtctgaaggccctgttcggtgcggagcacgccaacgtgcagcccaactcgggctcc
caggccaaccaaggcgtgttcttcgcgctgctgcagcccggcgacaccatcatgggcatg
agcctggccgaaggcggccacctcacccacggcatgccgctcaacatgtcgggcaagtgg
ttcaaggtcgtgagctacggtctcaacgacaaggaagagatcgactacgacgcgatggag
cggctggcgcacgagcacaagcccaagctcatcatcgccggtgcgtcggcctacagcctg
cgcatcgatttcgaacgcttcgcccgcgtcgccaaggccgtgggcgcgtacttcatggtg
gacatggcccactacgcggggctgatcgccggcggcgtctaccccaacccggtgccgttc
gccgacgtcgtgacctccaccacgcacaagagcctgcgcggcccgcgcggcggcatcatc
ctcatgaaggaccatgtcgccaagcagatcaacagcgcgatcttccccggcatccagggc
ggcccgctgatgcatgtcatcgccgccaaggccgtcgccttcaaggaggcgctgaccccc
gagttcaaggcctaccagcagcaggtcgtgaagaacgcccaggcgctggccgaaacgctg
gtcagccgcggcttgcgcatcgtcagtggccgcaccgagagccacgtgatgctcgtggac
ctgcgcgccaagggcatcaccggcaaggaggccgaggcggtgctgggccaggcgcacatc
acctgcaacaagaacgcgatccccaacgacccggaaaagcccatggtcacgagcggcatc
cggctcggctcaccggccatgaccacccgcggcttcaaggaggccgaggccgtgcagacc
gcgcacctcatcgccgacgtgctcgaccacccgcgcgacgaggccacgatcgcccgcgtg
cgcgcccaggtccacgagctgacccggcgcttcccggtctacggctga
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