Caldimonas aquatica: OMP39_10765
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Entry
OMP39_10765 CDS
T08587
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
saqa
Caldimonas aquatica
Pathway
saqa03030
DNA replication
saqa03430
Mismatch repair
saqa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
saqa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
OMP39_10765 (dnaE)
03430 Mismatch repair
OMP39_10765 (dnaE)
03440 Homologous recombination
OMP39_10765 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
saqa03032
]
OMP39_10765 (dnaE)
03400 DNA repair and recombination proteins [BR:
saqa03400
]
OMP39_10765 (dnaE)
Enzymes [BR:
saqa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
OMP39_10765 (dnaE)
DNA replication proteins [BR:
saqa03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
OMP39_10765 (dnaE)
DNA repair and recombination proteins [BR:
saqa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
OMP39_10765 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF4427
Motif
Other DBs
NCBI-ProteinID:
UZD54155
UniProt:
A0ABY6MQM2
LinkDB
All DBs
Position
complement(2366647..2370147)
Genome browser
AA seq
1166 aa
AA seq
DB search
MAFVHLRTHTEYSVVDGTLRIDDMVAAAASDQQVALAITDLNNLFGAIKFYKEARGKGVK
PLIGADVWVEPEAGERQPSRLLLLIQSREGYLNLCELLARGWTQNVQRAQACLKWEWLEA
MNGGLIALSGAEQGAVGQALAARDPRRAEAVARRLAGIFHNRFYIELQRYGQPGNEAHVR
AAVPLAAKLGLPVVATHPVQFQTPEDFEAHEARVCIAEGETLANPRRIKRFTREQYFKTQ
AEMEALFADIPSAIANTVEIAKRCNLTLVLGKPQLPDFPTPEVDGRRMAMEEYFRYAAHE
GLKERLEHLYPDAEERERQRPRYVERLDFEIATILKMGFPGYFLIVADFINWAKNNGCPV
GPGRGSGAGSLVAYALKITDLDPLRYNLLFERFLNPERVSMPDFDVDFCQSNRDRVIDYV
KEKYGREAVSQIATFGTMAAKAALRDVGRVLGMGYGHVDGIAKLIPAPPGKTVTLKRPGD
KPDPGLIYARKEAPEIEEREKNEEEVAELLALAERVEGLVRNIGMHAGGVLIAPGKITDF
CPLYMQPGSDAAVSQYDKDDVEAIGLVKFDFLGLATLTILEMAKEFIVRRHPDQKDFDFA
KIPLDDRATFQLLSEGKTVAVFQLESRGMQGMLRDAKPSVFEDIIALVALYRPGPMDLIP
SFCARKHGREEVVYPHPLMEEVLKETYGIMVYQEQVMQVAQRLGGYSLGGADLLRRAMGK
KKPEEMAKHRVIFAEGAAKNGIDADKANEIFDLMEKFAGYGFNKSHAAAYALLAYHTAWL
KVHYLAEFVAANMSVSIDDTDKLKVFYDDAVQLGIRFEPPNVNTGTYRFEPVADKVVRYG
LGAIKGTGQGAIEAIVQAREAGGPFKSLFDFCGRVDRSRVNKRVVEALIKAGAFDAVEPD
RARLLASISLAFEYADTQAAHADQGGLFDFGDSHASSTQEPELVAVPAWTLRERLTHEKV
AIGFYLSGHLFDEYEAEVRQFARRKIADLIDSREPQLLAGIVSDLRLVNGQRGRVAIFKL
DDKSDVIEAVANDELLEAHRDLFRDDELLIVQGKVQPDRFSGGLRLNVQQVWDLAAARCR
FGKYLRVAVNGSAPPVVELVRQHPPKRVETEQGELVQGLPVRLQLWREGYCGELDLGDEG
RFFPSDEALRRWRQGAHESQAAIVYE
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
atggctttcgtacacctgcgcacccacaccgaatactccgtcgtcgacggcaccttgcgc
atcgacgacatggtggccgcagcggcttcggatcagcaggtcgcgctcgccatcaccgac
ctgaacaacctgttcggtgcgatcaagttctacaaggaggcccgcggcaagggcgtcaag
cccctcatcggtgctgacgtgtgggtcgaacccgaggcgggcgagcgccagccgagccgc
ttgctgctgctgatccagagtcgggagggctacctcaatctctgcgagctgctcgcgcgc
ggctggacgcagaacgtgcagcgtgcgcaggcgtgcctcaagtgggagtggctggaggcg
atgaacggtggcctcatcgcgctgtcgggcgcggagcagggggccgtcggccaggcgctc
gcggcccgcgaccctcgccgtgccgaggccgtcgcccggcggctggccggcatctttcac
aaccgcttctacatcgaactgcagcgctacggccagccgggcaacgaggcccacgtgcgc
gcggccgtgccgctcgcggccaaactcgggctgccggtggtcgccacccatcccgtgcag
ttccaaacccccgaggacttcgaggcgcacgaggcgcgcgtatgtatcgccgaaggcgag
acgctggccaacccgcggcgtatcaagcgcttcacgcgcgagcagtacttcaagacgcag
gccgagatggaggcgctgttcgccgacatcccgagcgcgatcgccaacacggtggagatc
gccaagcgatgcaacctcacgctcgtgctcggcaagccgcagttgccggacttcccgacg
cccgaggtcgacggccgccgcatggcgatggaagagtacttccgctatgccgcgcacgaa
ggcctcaaagagcgtctggagcacttgtatcccgatgccgaggagcgcgagcggcagcgg
ccgcgctatgtcgagcggctcgacttcgagatcgccaccatcctgaagatgggcttcccg
ggctacttcctcatcgtggccgacttcatcaactgggccaagaacaatggctgcccggtg
ggcccgggacgcggctcgggcgccggctcgctcgtggcctatgcgctgaagatcaccgac
ctcgacccgctgcgctacaacctgctgttcgagcgcttcctcaatcccgagcgcgtgtcg
atgcccgacttcgacgtggacttctgccaaagcaaccgcgaccgggtcatcgactacgtc
aaggagaagtacggtcgcgaggccgtctcgcagatcgccaccttcggcacgatggcggcg
aaggcggcattgcgcgacgtgggccgcgtgctgggcatgggctacgggcacgtggacggc
atcgccaagctgattccggcgccaccgggcaagacggtgacgttgaagcgccccggcgac
aagcccgaccccggcctcatctacgcgcgcaaggaggcgcccgagatcgaggagcgcgag
aagaacgaggaagaggtcgccgagctcctggcgctggccgagcgcgtcgagggcctggtg
cgcaacatcggcatgcacgcgggcggcgtgctcatcgcccccggcaagatcaccgacttc
tgcccgctgtacatgcaaccgggcagcgatgcggccgtctcgcagtacgacaaggacgat
gtcgaggccatcggcctcgtgaagttcgacttcctggggctggcgacgctcaccatcctc
gagatggccaaggagttcatcgtccggcgccacccggaccagaaggacttcgacttcgcg
aagatccccctcgacgaccgtgcgacgttccaactgctctccgaaggcaagacggtcgcc
gtgttccagctggaatcacgcggcatgcaaggcatgctgcgcgatgccaagccgagcgtg
ttcgaggacatcatcgcgctggtggcgttgtaccgcccgggcccgatggacctgatcccc
agcttctgtgctcgcaagcacggccgcgaggaggtcgtctacccgcacccgctgatggag
gaggtgctcaaggagacctacgggatcatggtctaccaggagcaggtgatgcaggtcgcc
cagcgcctgggcggctactcgctcggcggcgccgacctcctgcgccgcgcgatgggcaag
aagaagcccgaggagatggccaagcaccgggtcatcttcgccgaaggggcggccaagaac
ggcatcgacgcggacaaggcgaacgagatcttcgacttgatggagaagttcgccggttac
ggcttcaacaagtcgcacgccgcggcctacgcgctgctggcctatcacaccgcctggctc
aaggtgcactacctggccgagttcgtcgcagccaacatgagcgtgtcgatcgacgacacc
gacaagctcaaggtgttctacgacgacgcggtgcagctgggcatccgcttcgaaccgccc
aatgtcaacaccggcacctaccgcttcgagccggtggccgacaaggtcgtgcgctacggc
ctcggggcgatcaagggcacggggcagggtgcgatcgaggccatcgtccaggcccgcgag
gccggcggccccttcaagagcctgttcgacttctgcggccgcgtcgaccgcagccgcgtc
aacaagcgcgtggtggaggcgctcatcaaggccggggcgttcgacgccgtggagccggac
cgcgcccgcctgctcgccagcatctcgctggccttcgagtacgccgacacgcaggctgcg
cacgcggaccagggcgggctcttcgacttcggcgactcgcacgcgtcctcgacacaagag
cccgagctcgtggccgtgccggcgtggaccctcagggagcgcctcacgcacgagaaggtg
gcgatcggcttttatctgtccggacacctgttcgatgagtacgaggccgaggtgcggcag
ttcgcccgccgcaagatcgccgacctcatcgacagccgggagccgcagctgctcgccggc
atcgtgagcgacctgcgactggtcaacggccagcgcgggcgcgtcgcgatcttcaagctc
gacgacaagagcgacgtgatcgaggcggtggccaacgacgaactgctcgaggcgcaccgc
gatctgttccgcgacgacgaactgctgatcgtgcagggcaaggtccagccggaccgcttc
tcgggcggcctgcgcctgaacgtgcagcaggtctgggacctggccgccgcccggtgccgg
ttcggcaagtacctgcgggtggcggtcaacggcagtgccccgccggtggtcgaactggtg
cgccagcatccgcccaagcgggtcgagacggagcagggcgagctggtccagggcttgccg
gtgcggctccaactgtggcgcgagggctactgcggcgaactggacctcggggacgagggg
cggttcttcccgagcgacgaggcgttgcgccgctggcggcaaggagcgcacgagtcgcag
gccgcgatcgtttacgagtag
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