KEGG   Caldimonas aquatica: OMP39_11335
Entry
OMP39_11335       CDS       T08587                                 
Name
(GenBank) ligase-associated DNA damage response DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
saqa  Caldimonas aquatica
Brite
KEGG Orthology (KO) [BR:saqa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:saqa03400]
    OMP39_11335
Enzymes [BR:saqa01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     OMP39_11335
    5.6.2.6  RNA 3'-5' helicase
     OMP39_11335
DNA repair and recombination proteins [BR:saqa03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    OMP39_11335
SSDB
Motif
Pfam: WH_Lhr DEAD_assoc DEAD Helicase_C ResIII DUF4226
Other DBs
NCBI-ProteinID: UZD54263
LinkDB
Position
complement(2491622..2494087)
AA seq 821 aa
MDDASHPAEGWFREQGWQPFDFQRAVWHAMLEGDSGLLHATTGAGKTYAVWFGALLRQLT
RGAEGSRGLRVLWITPMRALAADTVRALERPVPALGLGWQVGLRTGDTPAGERARQDRHW
PAALVTTPESLSLMLTREHARAELSGVDAVIVDEWHELLGNKRGVQVQLALARLRRWNPG
LLTWGLSATLGNLEQAMHVLLGSPHGRLVQGRVDKALVIDTLMPAEPGRFSWAGHLGAQM
QQPVVEEIDRAPTTLVFTNTRSQAEIWYQLLLEARPDWAGLVALHHGSIDKDAREWVELG
LKEGRLKAVVATSSLDLGVDFLPVERVLQIGSAKGVARLLQRAGRSGHAPGRASRVTLVP
THTLELIEAAAARRAALAGRIEKRASPDKPLDVLVQHLVTVALGGGFRADELFDEVRTAY
AYRHLTREEFLWVLRFVEQGGDSLHAYPEYHRVRQVDGVYRVTDRRTAMRHRLQVGTIVG
DATMQVKWLSGGKIGTIEESFIARLRRGDCFLFGGRMLEFVRVQDMAAYVRKPEHRRAGA
VPRWNGGKMPLSSELADAVLELLEAVDRGQYLDPELQGARPMLETQRALSRLPTPGTLLV
ERLRSREGVHLYLYPFAGRHVHLGLASLLAWRLAKDRPRTFSISVNDYGFELLSAQETDL
APVYDKRVFTTDQLLEDVLASLNSSELAERRFREIARVAGLVFVGYPGAPKSMKQLQASS
SLFYEVFRKYDAGNLLLSQAEREVLSQELDIARLRDSLERMAGQRIEAVELRHPSPLCLP
LMVERFREQLSTEKLGERLERIVRDATRALEAAPTAKTRSA
NT seq 2466 nt   +upstreamnt  +downstreamnt
atggacgatgcttcgcatcccgccgaggggtggttccgcgagcagggttggcagccgttc
gactttcagcgcgccgtctggcacgcgatgctggagggcgacagcggcttgctgcacgcc
accaccggcgccggcaagacctatgccgtgtggttcggcgcactgctgcgccagttgacg
cgcggcgccgagggcagccgcggcttgcgcgtgctgtggatcacgccgatgcgcgcgttg
gctgccgacacggtgcgcgcgctcgagcgcccggtgccggccttgggcttgggctggcag
gtgggtctgcgcacgggcgacaccccggccggcgagcgggcccgccaagaccggcattgg
cctgcggcactggtgacgacgcccgagtcgctcagcctcatgctcacccgcgagcacgcg
cgcgccgagctgagtggcgtcgatgccgtcatcgtggacgaatggcacgagctgctcggc
aacaagcgcggcgtgcaggtgcaactggcactcgcccggctgcggcgctggaatcccggc
ctgctgacctgggggctcagcgccacgctcggcaacctcgagcaggcgatgcacgtgctg
ctcggcagcccgcacggccgtctcgtgcaggggcgggtggacaaggccttggtcatcgac
acgctgatgccggccgagcccggccgcttctcgtgggccggccacctcggcgcgcagatg
cagcagccggtggtcgaggagatcgaccgcgccccgaccacgctcgtcttcaccaacacc
cggtcccaggccgagatctggtaccaactcctgctcgaagcgcggccggactgggccggc
ctcgtcgcgctgcatcacggctcgatcgacaaggacgcgcgcgaatgggtggagctcggg
ctcaaggaaggtcggctcaaggcggtggtggccacctcgtcgctcgacctcggcgtggac
ttcctgcccgtcgagcgggtgttgcagatcggctccgcgaaaggggtggcgcgcctgctg
caacgcgcggggcgcagcggtcatgcacccgggcgcgcgagccgcgtcacgctcgtgccc
acgcacacgttggaactcatcgaggcggccgcggcgcgacgtgccgcgctcgccgggcgc
atcgagaaacgcgcgtcgcccgacaagccgctggacgtgctggtgcagcacctcgtcacc
gtggcgctcggcggcggcttccgggccgacgagttgttcgacgaagtgcgcaccgcctac
gcttaccgccatctcacgcgcgaggagttcctctgggtgctgcgcttcgtcgaacaaggc
ggcgacagcctgcatgcctatcccgagtaccaccgggtgcggcaagtcgacggcgtgtac
cgcgtgaccgaccggcgcaccgcgatgcggcaccgcctgcaggtgggcaccatcgtgggc
gacgcgacgatgcaggtgaagtggctgtccggcggcaagatcggcaccatcgaagagagc
ttcatcgcccggctgcgccggggggactgctttctcttcggcgggcggatgctggagttc
gtgcgcgtgcaggacatggccgcctacgtccgcaagcccgagcatcgccgcgcgggcgcg
gtgccgcgctggaacggcggcaagatgccgttgtccagcgagttggccgatgccgtgctc
gagctgctcgaggcggtcgatcgcggccagtacctcgacccggaactgcagggcgcgcga
ccgatgctcgagacgcaacgtgcgctgtcgcgcctgcccacccccggcacgctcctcgtg
gagcgcttgcgttcgcgcgaaggggtgcacctgtacctctaccccttcgcgggccgccat
gtgcacctcgggctcgcgagcctgctggcctggcggctcgccaaggaccggccgcgcacc
ttcagcatttccgtcaacgactacggcttcgaactcctgagcgcgcaggagacggacctc
gcgccggtgtacgacaagcgcgtcttcaccaccgaccaactgctggaggacgtgctggcc
agtctcaactcctcggagctcgccgagcggcgttttcgcgagatcgcccgggtcgccggc
ctggtgttcgtgggctaccccggcgcgccgaagagcatgaagcagttgcaggcgtcgagt
tcgctcttctacgaagtgtttcgcaagtacgatgcgggcaatctgctgctctcgcaggcc
gagcgcgaggtgttgagccaggagctggacatcgcgcgactgcgcgacagcctggaacgc
atggccggccagcgcatcgaagcggtggagttgcggcaccccagccccctgtgcctgccg
ctaatggtggagcgttttcgcgaacaattgtcgaccgagaagctcggcgagcggctcgag
cgcatcgtacgcgacgccacgcgcgcgctggaggccgccccgacagcaaagacccgatcc
gcatga

DBGET integrated database retrieval system