Caldimonas aquatica: OMP39_12120
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Entry
OMP39_12120 CDS
T08587
Name
(GenBank) DNA photolyase family protein
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
saqa
Caldimonas aquatica
Brite
KEGG Orthology (KO) [BR:
saqa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
saqa03400
]
OMP39_12120
Enzymes [BR:
saqa01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
OMP39_12120
DNA repair and recombination proteins [BR:
saqa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
OMP39_12120
Prokaryotic type
OMP39_12120
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Usp
Motif
Other DBs
NCBI-ProteinID:
UZD54405
LinkDB
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Position
2660351..2661883
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AA seq
510 aa
AA seq
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MDKELDSALVWFRRDLRADDHAALYHALRAARRVWCVFVFDTDILQTLPRRDRRVEFIHA
SVRELDEELRALGARHGVPHAGLVVLHGRATEEIPRLAQALHVQAVYANHDYEPAARQRD
ARVRGRLADAGIVLHTSKDQVVFEADEVLTGAGSPYSVFTPYKTAWLKKLAPFYLRAYPV
ERHAAALASVPDAWRAAPPSLEALGFERTNLHELRLPPGMHGAAELLVDFLERMDRYHET
RDFPALKGPSYLSTHLRFGTVSIRRLARLAWERTQAGSLGAQTWLSELIWRDFYFQVLHH
HPHVVDHAFRPEYDRIKWEHGKHAEQLFAAWCEGRTGYPIVDAAMQQLNQTGYMHNRLRM
IAASFLTKDLGIDWRWGERYFAEKLNDYDLAANNGGWQWAASTGCDAQPYFRIFNPVSQS
RKFDPQGRFIRRYLPQLARLSSEAIHAPWQARPVELQAAGVALGHDYPQPIVSHEEARSR
TLARYGAARDGQRGQRRQEHATPRSPGVED
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atggacaaggaactcgacagcgccttggtgtggttccgccgcgatctgcgggcggacgac
cacgccgcgctctaccacgccctgcgcgccgcgcggcgggtgtggtgcgtcttcgtgttc
gacaccgacatcctgcaaacgctgccacgccgggaccggcgggtcgagttcatccacgcc
agtgtgcgcgagctcgacgaggagctgcgggcgctgggcgcgcgccacggtgtcccgcat
gcggggctcgtcgtgctgcacgggcgcgcgacggaagagatcccccgtctggcgcaggcc
ctgcacgtgcaggcggtgtacgccaaccacgattacgagcctgcggcgcggcagcgcgac
gcccgggtgcgcggccggctggccgatgccggcatcgtcctccacacctcgaaggaccag
gtcgtcttcgaggccgacgaggtgctgaccggcgcgggctcgccctacagcgtgttcacg
ccctacaagacggcttggctcaagaagctcgcgcccttctacctgcgggcctacccggtg
gagcgccatgcagcggcgctggccagcgtgccggacgcctggcgggccgcaccccccagc
ctggaggcgctcggcttcgagcgcaccaaccttcacgagttgcgcctgccgcccggcatg
cacggcgcggccgagctgctggtcgacttcctcgagcgcatggaccgctatcacgaaacg
cgcgacttcccggccctcaagggaccgagctacctctccacccacctgcgcttcggcact
gtctcgattcgccggctcgcgcggctggcatgggagcgcacgcaggcgggctccctgggg
gcgcaaacctggctgtccgagctcatctggcgcgacttctacttccaggtcctgcaccac
cacccgcacgtcgtggaccatgccttccgccccgagtacgaccgcatcaagtgggagcac
ggcaagcatgccgaacagctcttcgcggcctggtgcgaaggacgcaccggctacccgatc
gtggatgcggcgatgcagcagctcaaccagaccggctacatgcacaaccgcctgcgcatg
atcgccgccagcttcctcaccaaggacctcggcatcgactggcgctggggcgagcgctac
ttcgccgaaaagctcaacgactacgacctcgccgccaacaacggcggctggcagtgggcg
gcctcgaccggctgcgacgcgcagccctacttccgcatcttcaaccccgtgagccaaagc
cggaagttcgatccgcaggggcgcttcatccgccgctacctgccccagctcgcacgcctg
tcgtccgaggcgatccacgccccgtggcaagcccgaccggtcgaactccaggcagccggc
gtcgcgctggggcacgactacccgcagcccatcgtctcacacgaggaggcgcgctcgcgg
acgctcgcgcgctacggtgctgcccgcgacggccagcgcggccagcggcgccaggagcat
gcgactccccggtcgccgggcgtcgaggactga
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