Caldimonas aquatica: OMP39_12920
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Entry
OMP39_12920 CDS
T08587
Name
(GenBank) long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
saqa
Caldimonas aquatica
Pathway
saqa00061
Fatty acid biosynthesis
saqa00071
Fatty acid degradation
saqa01100
Metabolic pathways
saqa01212
Fatty acid metabolism
saqa02024
Quorum sensing
saqa04146
Peroxisome
Module
saqa_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
saqa00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
OMP39_12920
00071 Fatty acid degradation
OMP39_12920
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
OMP39_12920
09145 Cellular community - prokaryotes
02024 Quorum sensing
OMP39_12920
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
saqa01004
]
OMP39_12920
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
saqa04147
]
OMP39_12920
Enzymes [BR:
saqa01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
OMP39_12920
Lipid biosynthesis proteins [BR:
saqa01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
OMP39_12920
Exosome [BR:
saqa04147
]
Exosomal proteins
Exosomal proteins of breast milk
OMP39_12920
Exosomal proteins of breast cancer cells
OMP39_12920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
UZD54552
LinkDB
All DBs
Position
2828610..2830325
Genome browser
AA seq
571 aa
AA seq
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MKIADGVPASALKPWLKSYPPHVPAEVDINQYRSLVELLEEAFRKYAGRTAAVCMERPIT
FREIDEQSAALGAWLQHKGLAPGARVAIMMPNVLQYTIAIPAVLRAGYAVVNVNPLYTPR
ELEHQLKDSGAEAIIILENFAKTLQEVIDDTPVKHVVLASLGDLLGPFKGRFINFAVRHL
RKMVPEFKLPLDHGRTVTRFNAAVAEGSRLSLRRVECKADDVAFLQYTGGTTGVSKGATL
LHRNVVANIIQVEAWFKPVLDKLGDKQLTVVCALPLYHIFALTVCYMMGARLGMKNLLIP
NPRDIPGLIRTLRNYRVNMFPAVNTLFNALANDPEFAKLDFSELVVSNGGGMAVQAATAE
KWLKITGCPVVEGYGLSETSPVVTSNRLDLTQFTGTIGLPIPSTEVSIRDDEGNEVPFGQ
PGEICIRGPQVMAGYWNRPDETAKVMTADGFFKSGDVGVMDETGYVKIVDRKKDMILVSG
FNVYPNEIEQVVNMHPGVLECAAVGVPDAKSGEAVKLFVVKKDPALAEEDLMEYCRENFT
GYKRPKYIEFRDELPKSNVGKILRRELRGSQ
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcgccgacggagttcccgcatccgccctcaagccctggctcaagagctatccg
cctcacgtgccggccgaggtcgacatcaaccagtaccgcagcctggtcgagctgctcgaa
gaggcgttccgcaagtacgccggccgcactgcggcggtgtgcatggagcgcccgatcacc
ttccgcgagatcgacgagcagtcggccgcgctcggtgcgtggctgcaacacaaggggctg
gcccccggtgcacgcgtggccatcatgatgcccaacgtgctgcagtacaccatcgccatc
ccggcggtcctgcgcgccggctacgcggtcgtcaacgtcaacccgctctataccccgcgc
gagctcgagcaccagctcaaggactccggcgccgaggccatcatcatcctcgagaacttc
gccaagaccttgcaggaggtgatcgacgacacccccgtcaagcacgtggtcctggcctcg
ctcggtgacctgctcggcccgttcaagggccgcttcatcaacttcgcggtgcggcacctg
cgcaagatggtgcccgagttcaagctgccgctcgaccacggccgtaccgtcacacgattc
aacgccgcagtggccgaaggctcgcgcctctccctgcgccgcgtcgaatgcaaggccgac
gacgtcgcattcctgcagtacaccggcggcaccacgggcgtctccaaaggcgccacgctg
ctgcaccgcaacgtcgtcgccaacatcatccaagtcgaggcctggttcaagccggtgctg
gacaagctgggcgacaagcagctcaccgtcgtgtgcgcgctacccctctaccacatcttc
gcgctcaccgtgtgctacatgatgggcgcgcgcctggggatgaagaacctgctcatcccc
aacccgcgcgacattccgggcctcatcaggacgctgcgcaactaccgcgtcaacatgttc
ccggccgtcaacacgctgttcaacgcgctcgccaacgaccccgagttcgccaaactcgac
ttctccgagctcgtggtcagcaacggcggcggcatggccgtgcaagctgccaccgccgag
aagtggctgaagatcaccggctgcccggtggtcgaagggtacggcctgtccgaaacctcg
cctgtggtcaccagcaaccggctcgacctcacgcagttcacgggcaccatcggcctgccg
attccctccaccgaagtgtccatccgcgacgacgagggcaacgaagtgcccttcgggcag
cccggcgagatctgcatccgtgggccccaggtcatggcgggctactggaaccgaccggac
gaaaccgccaaggtcatgacggccgacgggttcttcaagtcgggggacgtcggcgtgatg
gacgagaccggctacgtcaagatcgtcgaccgcaagaaggacatgatcctcgtgtcgggc
ttcaacgtctacccgaacgagatcgagcaggtggtcaacatgcaccccggcgtgctcgag
tgcgccgcggtcggggtccccgacgccaagtccggcgaggcggtcaagctcttcgtcgtc
aagaaagacccggcgcttgccgaagaggacctcatggagtactgtcgcgagaacttcacc
ggctacaaacggcccaagtacatcgagttccgcgatgagttgcccaagtccaacgtcggc
aagatcctgcgccgcgaactgcgcggcagccagtga
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