Caldimonas aquatica: OMP39_13015
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Entry
OMP39_13015 CDS
T08587
Name
(GenBank) dipeptide ABC transporter ATP-binding protein
KO
K02032
peptide/nickel transport system ATP-binding protein
Organism
saqa
Caldimonas aquatica
Pathway
saqa02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
saqa00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
OMP39_13015
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
saqa02000
]
OMP39_13015
Transporters [BR:
saqa02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
OMP39_13015
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_22
AAA_21
SMC_N
AAA_16
AAA_19
RsgA_GTPase
AAA_29
AAA_5
AAA_25
nSTAND1
nSTAND3
PRK
AAA_13
Rad17
Motif
Other DBs
NCBI-ProteinID:
UZD54565
LinkDB
All DBs
Position
complement(2849503..2850495)
Genome browser
AA seq
330 aa
AA seq
DB search
MTALIEVNDLAKTFDVSAPWLNRVIERKPRQFVHAVDGVSFAIERGKTLALVGESGCGKS
TVARLLVGLYDPTRGEVRFDGQPTAAAFASRAGRALRRRMQMIFQDPYASLNPRWKVREI
IAEPLREHGLLTDAAAIEQRVAELLRMVGLAAADMEKYPHQFSGGQRQRISIARALATRP
EFLVCDEPTSALDVSVQAQVLNIMKDLQRDQGLTYLFISHNLAVVRHVADEVGVMYLGRL
VELAPKRTLFAQPQHPYTRMLLDAIPDIRMTGRARTPVQGEVPNPLNPPSGCAFHPRCPH
ARERCKRERPALLELRGVKVACHAVEEGRL
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgaccgctctcatcgaagtcaatgacctggccaagaccttcgatgtctcggccccgtgg
ctcaaccgcgtcatcgagcgcaagcccaggcagttcgtgcacgcggtcgacggcgtgagc
ttcgcgatcgagcgtggcaagacgctggccctggtgggcgagtcgggctgcggcaagagc
acggtggcgcggctgctcgtcggcttgtacgaccccacgcgcggcgaggtgcgcttcgac
gggcaaccgacggccgcggcgttcgcgagccgcgccgggcgtgcgctgcgcaggcggatg
cagatgatcttccaggacccgtacgcgagcctcaatccccgttggaaggtgcgcgaaatc
atcgccgagccgttgcgcgagcatgggctgctgaccgacgcggccgccatcgagcagcgc
gtggcagagctgctgcgcatggtgggcctggccgcagcggacatggagaagtacccgcac
cagttctcgggggggcagcggcagcgcatctcgatcgcgcgagccttggcgacccggccg
gagttcctcgtgtgcgacgagcccacctcggcgctggacgtttcggtccaggcgcaggtc
ctcaacatcatgaaggacctgcagcgcgaccagggcctgacgtacctgttcatctcgcac
aacctggcggtcgtgcgccacgtggccgacgaggtgggcgtgatgtatctgggtcgtctg
gtggagctggcgcccaagcgcacgctctttgcgcagccgcagcacccctacacacggatg
ctgctcgatgcgattcccgacatccgcatgaccggccgcgcgcgcacgccggtgcaggga
gaggtgcccaacccgctcaacccgccttcgggatgcgcctttcacccccgctgcccgcat
gcccgcgaacgctgcaagcgcgagcgtcccgcgttgctggagttgcggggcgtgaaggtg
gcgtgccacgcggtggaggaagggcgcctctga
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