Caldimonas aquatica: OMP39_13165
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Entry
OMP39_13165 CDS
T08587
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
saqa
Caldimonas aquatica
Pathway
saqa00061
Fatty acid biosynthesis
saqa00071
Fatty acid degradation
saqa01100
Metabolic pathways
saqa01212
Fatty acid metabolism
saqa02024
Quorum sensing
saqa04146
Peroxisome
Module
saqa_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
saqa00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
OMP39_13165
00071 Fatty acid degradation
OMP39_13165
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
OMP39_13165
09145 Cellular community - prokaryotes
02024 Quorum sensing
OMP39_13165
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
saqa01004
]
OMP39_13165
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
saqa04147
]
OMP39_13165
Enzymes [BR:
saqa01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
OMP39_13165
Lipid biosynthesis proteins [BR:
saqa01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
OMP39_13165
Exosome [BR:
saqa04147
]
Exosomal proteins
Exosomal proteins of breast milk
OMP39_13165
Exosomal proteins of breast cancer cells
OMP39_13165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
LPD22
DUF2464
Motif
Other DBs
NCBI-ProteinID:
UZD54595
LinkDB
All DBs
Position
2881826..2883760
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AA seq
644 aa
AA seq
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MQTTFPRLLLEHAARRPDAPALREKEYGIWQTLTWAQLAQMVRHLAGGLAEAGLQRGQHV
VVIGENRPRLYATMLAAQSLGAVPVPLYQDAVAAEFVYPINNAEVAFAVVEDQEQVDKLL
EIRAQCPQLACIWYDDGRGLRNYREPGLESLDALIERGREHDARHPGLFEAEVEKAQADD
VAAMFFTSGTTGNPKGVVHTHRSLLDRAEAGARFDHLTEREEVLAYLPPAWIGQNCFSYA
QWLVCGYVVNCPESSSTVMIDLKEIGPTYYFAPPRIFEGLLTSVTIRMEDAGRLKRWLYK
TFMDVARRVGPKRMDGQRLSFTEKLLYGLGNLLVYGPLRNNLGMSRIRVAYTAGEAIGPD
LFTFYRSIGINLKQLYGSTETAVFVCLQPDHEVKADTVGVPIEGVEIKLDANGEILIRSP
GLLKEYYKNPQATAEVKTEDGWYRSGDAGFIDASGHLKIIDRAKDVGRMADGSMFAPKYI
ENKLKFFPHIKEAVAFGDKRDKVCAFINIDFEAVGNWAEKRGLPYAGYTDLAAKPEVYEL
IRECVEKVNADLAADEKLAGSQIHRFLILHKELDADDGELTRTRKVRRGYIAEKYQVLVD
ALYAGKSSQYIETQVRFEDGRTGTVSADLAIVDAKTYPAMRRAA
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
gtgcagacgacgtttccccgattgctgctcgagcacgccgcccggcgccccgacgcgcct
gcgctgcgcgagaaggagtacggcatctggcagacgctgacctgggcccagctcgcgcag
atggtgcgccacttggccggcgggttggccgaagccggtttgcagcggggccagcacgtg
gtggtgatcggcgagaaccgcccgcggctgtacgcgacgatgctggcggcgcagtcgctg
ggcgccgtgccggtaccgctgtaccaggacgcggtggcggccgagttcgtctatccgatc
aacaacgccgaggtcgccttcgccgtggtcgaagaccaggagcaggtcgacaagctgctc
gagatccgggctcagtgcccgcagctggcatgcatctggtacgacgacggccgcggcctg
cgcaactaccgcgagccgggcctggaaagcctggatgccctgatcgagcggggccgggag
cacgacgcccggcatcccggcctgttcgaggccgaggtggagaaggcccaggcggacgac
gtggccgcgatgttcttcacctccggcaccaccggcaaccccaagggcgtggtgcacacc
caccgctccttgctcgaccgcgccgaggccggggcacgcttcgaccacctcaccgagcgc
gaggaggtgctggcctacctgccgcccgcgtggatcggacagaactgcttcagctacgcc
cagtggctggtgtgcggctacgtggtgaactgccccgagtcgtcctccaccgtgatgatc
gacctcaaggagatcgggcccacctactacttcgcgccaccacgcatcttcgagggcctg
ctcaccagcgtcaccatccgcatggaagacgccggacgcctcaagcgctggctctacaag
accttcatggacgtggcgcggcgcgtggggcccaagcgcatggacggccagcggctcagc
ttcacggaaaagctgctgtacgggctcggcaacctgctggtgtacgggccgctgcgcaac
aacctgggcatgagccgcatccgcgtggcctacaccgcgggcgaggcgatcggaccggac
ctgttcaccttctaccgctcgatcggcatcaacctcaagcagctctacggctcgaccgag
acggcggtgttcgtctgcctgcagccggaccacgaggtcaaggccgacaccgtcggcgtg
ccgatcgaaggtgtagagatcaagctcgatgcgaacggcgagatcctcatccgctcgccg
gggctgctcaaggagtactacaagaacccgcaggcgaccgccgaggtcaagaccgaagat
ggctggtaccgcagcggcgatgccggcttcatcgacgccagcggtcatctcaagatcatc
gaccgggccaaggacgtgggccgcatggccgacggttcgatgttcgcgcccaagtacatc
gagaacaaactcaagttcttcccgcacatcaaggaggcggtggccttcggcgacaagcgc
gacaaggtctgcgccttcatcaacatcgacttcgaggccgtgggcaactgggccgagaag
cgcgggctcccctatgccggctataccgacctggccgccaaacccgaggtgtacgaactc
atccgcgagtgcgtcgaaaaggtcaatgccgacctcgccgccgacgagaaactcgccggc
agccagatccaccgcttcctgatcctccataaggagctcgacgcggacgacggcgaactc
acccgcacccgcaaggtccgccggggctacatcgccgagaagtaccaggtgctggtcgac
gccctgtacgcgggcaagtcctcgcagtacatcgagacgcaggtgcgcttcgaggacggg
cgcaccggcaccgtgagcgccgacctggcgatcgtggatgccaagacctaccccgccatg
aggagggccgcatga
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