KEGG   Caldimonas aquatica: OMP39_13395
Entry
OMP39_13395       CDS       T08587                                 
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
saqa  Caldimonas aquatica
Pathway
saqa03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:saqa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    OMP39_13395 (rpoA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:saqa03021]
    OMP39_13395 (rpoA)
   03400 DNA repair and recombination proteins [BR:saqa03400]
    OMP39_13395 (rpoA)
Enzymes [BR:saqa01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     OMP39_13395 (rpoA)
Transcription machinery [BR:saqa03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     OMP39_13395 (rpoA)
DNA repair and recombination proteins [BR:saqa03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      OMP39_13395 (rpoA)
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_L RNA_pol_A_CTD RNA_pol_L_2
Other DBs
NCBI-ProteinID: UZD54638
LinkDB
Position
complement(2927678..2928664)
AA seq 328 aa
MQTNLLKPKAINVEPLGGHRAKVTLEPFERGYGHTLGNALRRVLLSSMVGYAPTEVTIAG
VLHEYSMIDGVQEDVVHIMLNLKGVVFRLHNREEVTLVLRKEGEGPVTAGDIQTPHDVEI
INPEHVIAHLSQGGKLDMQIKVEKGRGYVPGNMRRFGDEPTKAIGRIVLDASFSPVKRVS
YTVESARVEQRTDLDKLVMEIETNGAISPEEAIRASAKILVEQLAVFAQLEGSEIAAFEQ
PAQRAQQFDPILLRPVDELELTVRSANCLKAENIYYIGDLIQRTETELLKTPNLGRKSLN
EIKEVLASRGLTLGVRLENWPPSGLDKR
NT seq 987 nt   +upstreamnt  +downstreamnt
atgcaaacgaatttgctcaaacccaaagccatcaacgtggagccgctgggcggccaccgc
gcgaaggtgacgctggagcccttcgagcggggctacggccacacgctgggcaatgccctg
cgccgcgtgctgctgtcgtcgatggtgggttacgcgccgaccgaggtgacgatcgccggc
gtgctgcacgagtactccatgatcgatggcgtgcaggaagacgtcgtccacatcatgctc
aacctgaagggcgtggtgttccgcctgcacaaccgggaagaggtcaccctggtgctgcgc
aaggaaggcgagggcccggtgacggcgggtgacatccagacgccgcacgacgtcgagatc
atcaaccccgagcatgtgatcgcccacctgtcgcagggcggcaagctcgacatgcagatc
aaggtcgagaagggccgcggatacgttccgggcaacatgcgccgctttggcgatgagccg
accaaggcgatcggccgcatcgtgctggatgcgtcgttctcgcccgtcaaacgcgtgagc
tacaccgtcgagagcgctcgcgtggagcagcgcaccgacctggacaagctggtgatggag
atcgagaccaacggcgccatctcgcccgaggaagcgatccgggcgtcggccaagatcctg
gtggagcaactggccgtgttcgcccagctggaaggcagcgagatcgccgcgttcgagcag
ccggcccagcgcgcgcagcaattcgacccgatcctgctgcgcccggtggacgagctcgag
ctgaccgtgcgctcggccaactgcctgaaggccgagaacatctactacatcggcgacctg
atccagcgcaccgagaccgagctgctcaagaccccgaacctgggtcgcaagtctctcaac
gagatcaaggaagtgctggcttcgcgcggcctgacgctcggcgtgcggctcgagaactgg
ccgccgtccggcctggacaagcgctga

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