Caldimonas aquatica: OMP39_13690
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Entry
OMP39_13690 CDS
T08587
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
saqa
Caldimonas aquatica
Pathway
saqa03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
saqa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
OMP39_13690
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
saqa03400
]
OMP39_13690
Enzymes [BR:
saqa01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
OMP39_13690
DNA repair and recombination proteins [BR:
saqa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
OMP39_13690
Prokaryotic type
OMP39_13690
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
UZD54693
UniProt:
A0ABY6MRT0
LinkDB
All DBs
Position
complement(2978264..2979028)
Genome browser
AA seq
254 aa
AA seq
DB search
MRPVDLFAAAPAAAGPRPPSLPDNALREPLANCFDRVPADWRAVTEPFRRSPAGQALIEF
VDARRAAGAVIYPAEVFRALQLTPLAQVKAVILGQDPYHGPGQAQGLAFSVPSGQRLPPS
LRHIFQEARCAGGAAADGDLTPWARQGVLLLNTVLTVEDGCPHSHAGRGWEPLTDALIAH
VSAHAGPCVFLLWGGPAQKKRGLVDESRHLVLVANHPSPLSARRPPQPFLGCGHFAQANA
WLAQHRPADGPVRW
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgaggccagtcgaccttttcgccgccgcgccggccgccgcggggccgcgcccgccgagc
ctgcccgacaacgcgctgcgagagccgctcgcgaactgcttcgaccgtgtgccggccgac
tggcgggccgtcaccgagcccttccgccgcagtcccgccggccaggcgctgatcgagttc
gtcgacgcccgccgcgcggccggggccgtgatctacccggccgaggtcttccgcgcgctg
caactcaccccgctggcgcaggtcaaggccgtcatcctcgggcaggacccgtaccacggt
cccgggcaggcgcagggcttggcgttctcggtcccctccgggcaaaggctgccccccagt
ctgcgccacatcttccaggaggcgcggtgtgccggcggcgcggcggccgacggcgatctg
accccctgggcgcggcagggggtgctgctgctcaacaccgtcctcacggtggaggacggt
tgcccccacagtcacgccggccgcggctgggagccgctcaccgacgccctcatcgcgcat
gtgagcgcccacgccgggccgtgcgtgttcctgctgtggggtgggcctgcacagaaaaag
cgcgggctcgtggacgagtcgcgccacctcgtgctcgtcgccaaccacccgtcgcccctg
tcggcgcgccggcccccgcagccgttcctgggctgcggccatttcgcgcaagccaacgcc
tggctcgcgcaacaccggccggccgacggtcccgtgcgctggtaa
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