KEGG   Caldimonas aquatica: OMP39_14610
Entry
OMP39_14610       CDS       T08587                                 
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
  KO
K11900  type VI secretion system protein ImpC
Organism
saqa  Caldimonas aquatica
Brite
KEGG Orthology (KO) [BR:saqa00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:saqa02044]
    OMP39_14610 (tssC)
Secretion system [BR:saqa02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   OMP39_14610 (tssC)
SSDB
Motif
Pfam: VipB VipB_2
Other DBs
NCBI-ProteinID: UZD54873
LinkDB
Position
complement(3192381..3193874)
AA seq 497 aa
MSAAVLQDNAPGLAASATSGLLDEIVAQSKVATTESEHRRAKDLIAELVKEVMQGTVVVS
QNLSATLDARVAELDRLISAQLSAVMHAPEFQRLESTWTGLHYLCKHTSTGESMKIKVLN
ASKKDLVRDFKTAIDFDQSTLFKKVYEEEFGTFGGSPFGALIGDYEIGRHPEDMYFLEQM
SHVAAAAHAPFISAASPQLFGLESFTELGKPRDLSKVFDTVEYAKWKSYRESEDSRYVGL
TLPRFLGRLPYDPTEGTVTEGFNFVEDVDGSDHSKYLWVNTAYAFGARLVAAFENYGWCA
AIRGVEGGGLVEDLPTHTFKTDDGEIALKCPTEISITDRREKELSDLGFIPLVHCKNTDY
AAFFGAQSTQKPKKYDSDAANANAALSAQLQYMFAVCRIAHYMKAMMRDKIGSFASASNV
EDFLNRWISQYVTSDDNATQAVKAQYPLREASVQVSEVPGRPGVYRAVSFVRPHFQLDEL
SVSLRLVAELPQGAGRG
NT seq 1494 nt   +upstreamnt  +downstreamnt
atgagtgccgccgtcttgcaagacaacgcgcccgggctggccgcgtccgcgacctcgggg
ctgctcgacgagatcgtcgcgcaaagcaaggtcgcgaccaccgaatccgaacaccggcgc
gccaaggacctcatcgccgagctcgtcaaagaggtgatgcaaggcacggtggtcgtgtcg
cagaacctctcggccacgctcgatgcacgcgtggccgagctcgaccggctcatctccgca
cagctgtcggcggtgatgcatgctcccgagttccagcgcctcgaaagcacctggacgggg
ctgcactacctgtgcaagcacacatccaccggcgagtcgatgaagatcaaggtgctgaac
gcctccaagaaggatctggtgcgcgacttcaagacggcgatcgacttcgaccagagcacg
ctcttcaagaaggtgtacgaggaggagttcggcaccttcggcggctcgccgttcggcgcg
ctcatcggcgactatgagatcgggcggcatcccgaggacatgtacttcctcgaacagatg
tcccatgtcgccgcggccgcgcacgcccccttcatctcggcggcgtcgccccagctgttc
ggtctggaaagcttcaccgagctgggcaagccgcgcgatctgtcgaaggtgttcgacacg
gtcgagtacgcgaagtggaagtcctatcgcgagtccgaggactcccgctacgtgggcctc
acgctgccacgctttctcggccgcctgccgtacgaccccaccgagggcaccgtcaccgag
ggcttcaacttcgtcgaggacgtggacggcagcgaccactccaagtacttgtgggtcaac
acggcctatgcgttcggtgcgcggctcgtcgcggcgttcgagaactacggttggtgcgcc
gccatccggggcgtcgaggggggcgggctggtcgaagacctgcccacgcacaccttcaag
accgacgacggcgagatcgcgttgaaatgcccgaccgagatctcgatcaccgaccggcgc
gagaaggagctgagcgacctcggtttcatcccgctcgtgcattgcaagaacaccgactac
gcggcgttcttcggggcgcagtcgacgcagaagcccaagaagtacgacagcgatgccgcc
aacgccaacgccgcgctgtcggcccagctgcagtacatgttcgccgtgtgccgcatcgcg
cactacatgaaggcgatgatgcgcgacaagatcggcagtttcgcttcggcctccaatgtc
gaggacttcctcaatcgttggatcagccagtacgtgacttccgacgacaacgccacgcag
gcggtcaaggcgcagtatccgctgcgcgaggcgagcgtgcaggtctctgaagtaccgggg
cggccgggcgtctaccgtgcggtgtcgttcgtgcggccgcacttccagctcgacgagctg
tcggtgtcgttgcggctggtcgccgagctgcctcaaggggccgggcgcggctga

DBGET integrated database retrieval system