KEGG   Caldimonas aquatica: OMP39_14660
Entry
OMP39_14660       CDS       T08587                                 
Symbol
tssM
Name
(GenBank) type VI secretion system membrane subunit TssM
  KO
K11891  type VI secretion system protein ImpL
Organism
saqa  Caldimonas aquatica
Pathway
saqa03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:saqa00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    OMP39_14660 (tssM)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:saqa02044]
    OMP39_14660 (tssM)
Secretion system [BR:saqa02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   OMP39_14660 (tssM)
SSDB
Motif
Pfam: IcmF-related_N IcmF-related IcmF_C IcmF_helical DUF4381 LPG_synthase_TM DUF6203 DUF4229
Other DBs
NCBI-ProteinID: UZD54883
LinkDB
Position
3201923..3205714
AA seq 1263 aa
MSRLWSFLIDPRTLSAIGILALIAFLFLGADVLRVALVWAAGASAVVLAVALGVWLYRRR
RERRAAAQFGQALEQQAQAAVQAAPAAKKAEVDALRQRLAEAVKTIKTSRLGQETGAAAL
YELPWYMVIGNPAAGKSTAIVRSGLKFPFANQTDNILQGIGGTRNCDWFFTNEGILLDTA
GRYAVHEEDRQEWFGFLSLLKRHRPKAPINGILIVASVADIAGHRPDFAITLAKQLRQRV
QELTEQLGVFAPVYLVFTKADLIAGFAEFFEDRDPAEREKVWGATLPYDTQGRSDAIAAF
DERFDELFAGLKEMSVARMAMHRGEELPPGVLTFPLEFAALKPALRSFIGTLFEDNPYQH
RPIFRGFYFTSSVQEGTSHSRASEKVAQQFALDLKPRTVASVYSQSGFFLKDLFQKVIFA
DKHLVRQHTTRAQRRWRYAAFATSVVVLGAMLGGWAWSYAGNRQLLANVQADLDKVIKLQ
KDRLDLQSRIEALEILQDRLEQLQALRDDRPLGLGLGLYQGDEIERKLRAEYFAGVQQLM
LAPVAESIEAYLTEVNGNAAALQPLTRLPASGAAPVKVSAAAGTPYQAAAPDSVEDAYNA
LKTYLMLADRQRLDPGHLADQITRFWRGWLEANRGAMPREQMIRSAERMLSFLLTQVSDP
AFPQVKTNLTLVDTTRENLRRVVRGMPARERVYSEIKSRASTRFAPVTVLRIVGEQDRDT
VVGSYTVNGAFTRDAWEKYVEDAIKEAAAKELQSTDWVLQTAVRDDLTLEGSPEQIQKAL
VQMYKTEYVAEWQKFLRGISVPAFGSFDQAVARMNRLGDPQLSPIQKVLDTLYRETSWDN
PSVVNERLAGAQRGVVEWFRQTILRQAPSRVEVNVKVTADQAAIPMGPIGKEFAGIARLM
APRHDGEALARTYLQHLAKIRTRFNQIKNQGDPGPASRTLMAQTLEGNGSDLADALRFVD
EQMLTGLPDGAKTALRPLLVRPLMQAFAVLVPPAEAEINRVWTAQVYEPFQRSLAAKYPF
DTASKVEAAPAEIAKIFGPDGAIARFSNDTLGTLVVRRGDQITPRQWAEMGVRLQPEFTG
AFHAWVAPVGGGAGGGATASAAAQTRFQIQPAPAQGLSEYSIDIDGQTLRYRNAAPAWSD
FTWPGPQAGAGVRISGVKYDGSSVEFLTEPGGFGLERMVAAAQRKRIDASTFELTWPKGD
TAVTVRLRIVSTPAQVGAGGAAAEAASGANGLRGVRLPATVALASAWEEQVAAHAGTAPE
AKP
NT seq 3792 nt   +upstreamnt  +downstreamnt
atgagccgactttggagctttctcatcgacccccgcacgctgagcgcgatcgggatcctg
gccttgattgcgttcctgttcctgggcgccgatgtgctgcgtgtggcgctcgtttgggcg
gccggcgcgagcgccgtcgtgctggcggtggcgctgggcgtgtggctctaccgccgacgg
cgcgagcgccgggccgcggcgcagttcggccaggccctcgaacagcaggcgcaggcggcc
gtgcaagcggcgccggccgccaaaaaggccgaggtcgacgcgctgcgccagcggctggcc
gaggcggtcaagacgatcaagacctcgcggctgggccaggaaacgggcgccgccgcgctg
tatgagctgccgtggtacatggtgatcggcaacccggcggcgggcaagagcacggcgatc
gtgcgctcggggctgaagtttccgttcgcgaaccagaccgacaacatcctgcagggcatc
ggcggcacccgcaactgcgactggttcttcacgaacgaaggcattctgctggacaccgcc
ggtcgctatgcggtgcacgaggaggaccgccaggaatggttcggttttctttcgctgctc
aagcggcaccggcccaaggcgcccatcaacggcattctgatcgtcgccagcgtggccgac
atcgcgggccaccggccggacttcgcgatcacgctggccaagcagctgcgccagcgggtg
caggagctgaccgagcagctgggcgtgttcgcgccggtgtacctggtgttcacgaaggcc
gacctcatcgccggcttcgccgagttcttcgaggaccgcgacccggccgagcgcgagaaa
gtgtggggcgcgacgctgccttacgacacgcaaggccgcagcgacgcgatcgccgcgttc
gacgaacgcttcgacgagctgttcgcggggctcaaggagatgtcggtcgcgcgcatggcg
atgcaccgcggcgaggaactgccgccgggcgtgttgacgtttccgctggagttcgcggcg
ctcaagccggcgctgcggtcgttcatcggcacgctgttcgaggacaacccgtaccagcac
cgcccgatcttccgcggcttctacttcaccagctcggtgcaggaaggcacgtcgcacagc
cgcgccagcgagaaggtcgcgcagcagttcgcgctggacttgaagccgcgcacggtcgcc
tcggtgtattcgcaaagcggcttcttcctgaaggacctgttccagaaggtcatcttcgcg
gacaagcacctggtgcgtcagcacaccacgcgggcgcagcgtcgctggcgctatgccgcc
ttcgcgacctcggtggtcgtgctcggggcgatgctgggcggctgggcctggtcgtatgcc
ggcaaccggcagctgctggccaacgtgcaggccgacctcgacaaggtgatcaaactccag
aaggaccggctggacctgcagtcgcgcatcgaggcgctggagatcctgcaggaccggctg
gaacagttgcaagcgctgcgcgacgaccggccgctgggcctggggctcgggctctaccag
ggcgacgagatcgagcgcaagctgcgcgccgagtacttcgcgggcgtgcagcagttgatg
ctcgcgccggtggccgagagcatcgaggcctacctcaccgaggtcaacggcaacgccgcg
gcgctgcagccgctcacccggctgccggcctcgggcgcggcgccggtcaaggtcagtgcc
gccgcaggcaccccgtaccaggcggcggcgccggacagcgtcgaggacgcctacaacgcc
ctcaagacctacctgatgctggccgaccgccagcgcctggacccggggcacctggccgat
cagatcacccgcttctggcgcggctggctggaggccaatcgcggcgccatgccgcgcgag
cagatgatccgcagcgccgagcgcatgttgagcttcctgctcacgcaggtgagcgatccg
gccttcccgcaggtgaagacgaacctcacgctggtggacaccacgcgcgagaacctgcgc
cgggtggtgcggggcatgccggcgcgcgagcgcgtctacagcgagatcaagtcgcgcgcg
tcgacgcgtttcgccccggtgacggtgctgcgcatcgtcggcgagcaggaccgcgacacc
gtcgtgggctcgtacaccgtcaacggcgcgttcacgcgcgacgcctgggagaagtacgtc
gaggacgcgatcaaggaggccgcggccaaggagttgcaaagcaccgactgggtgctgcag
accgccgtgcgcgacgacctcacgctggagggcagcccggagcagatccagaaggcgctg
gtgcagatgtacaagaccgagtacgtggccgaatggcagaagttcctgcgcggcatctcg
gtgccggccttcggcagcttcgatcaggcggtggcccgcatgaatcgcctgggcgacccg
cagctgtcgccgatccagaaggtgctcgacacgctgtaccgcgagacgtcttgggacaac
ccgagcgtcgtcaacgagcggctggccggcgcgcagcgcggcgtcgtggagtggttccgg
cagacgatcctgcggcaagcgccctcgcgcgtcgaggtgaacgtcaaggtgaccgccgac
caggccgcgatcccgatggggccgatcggcaaggagttcgccggcatcgcccggctgatg
gcgccgcggcatgacggcgaggcgctcgcccgcacgtacttgcagcacctggccaagatc
cgcacgcgcttcaaccagatcaagaaccagggcgacccggggccggcgtcgcgcacgctg
atggcgcagacgctcgagggcaacggttcggacctggccgacgcgctgcgcttcgtcgac
gagcagatgctcaccggcctgcccgatggggccaagacggcgctgcgaccgctgctggtg
cgcccgttgatgcaggccttcgcggtgctggtgccgccggccgaggccgagatcaaccgc
gtgtggacggcccaggtgtacgagccgttccagcggtcgctggcggccaagtacccgttc
gacaccgcctcgaaggtcgaggcggcgcccgccgagatcgccaagatcttcggtcccgac
ggcgccatcgcgcgcttttcgaacgacaccctcggcacgctggtggtgcggcgcggcgac
cagatcacgccgcgccagtgggccgagatgggcgtgcgcctgcaaccggagttcaccggc
gcgttccacgcctgggtcgccccggtgggcggcggagcgggcggcggggccacggcctcg
gccgccgcgcagacacgcttccagatccagccggcgccggcgcaggggctgtccgaatac
tccatcgacatcgacgggcagacgctgcgctatcgcaatgcggcccccgcttggagcgac
ttcacctggccggggcctcaggccggcgccggcgtgcgcatcagcggggtcaagtacgac
ggctcgtcggtcgagttcttgaccgaaccgggcggcttcggactcgaacgcatggtcgcc
gccgcgcagcgcaagcgcatcgatgcctcgaccttcgagctgacttggcccaagggcgac
acggcggtgacggtgcggctgcgcatcgtgagcacgccggcgcaggtcggcgcgggcggc
gccgcggccgaggcggcctcgggcgcgaacggcttgcggggcgtgcgtctgcccgccacg
gtcgcgctggcctcggcgtgggaggagcaggtcgccgcccacgccggcacggcgccggag
gccaagccgtga

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