Silvanigrella aquatica: AXG55_00020
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Entry
AXG55_00020 CDS
T09772
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
saqi
Silvanigrella aquatica
Brite
KEGG Orthology (KO) [BR:
saqi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
saqi03032
]
AXG55_00020
03400 DNA repair and recombination proteins [BR:
saqi03400
]
AXG55_00020
Enzymes [BR:
saqi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
AXG55_00020
DNA replication proteins [BR:
saqi03032
]
Prokaryotic type
DNA Topoisomerases
AXG55_00020
DNA repair and recombination proteins [BR:
saqi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AXG55_00020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_insert
GyrB_hook
Motif
Other DBs
NCBI-ProteinID:
APJ02406
UniProt:
A0A1L4CWT1
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All DBs
Position
4414..6864
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AA seq
816 aa
AA seq
DB search
MFNKSNLFVCDPGNYEKKDDGYGSSNITVLEGLEAVRKRPGMYIGNTGTVGLHHLIYEVV
DNSIDEFLAGHGSQIEITLHLDGSVTVADNARGIPVDKHPSGKSALEVVMTILHAGGKFD
NEIYKTSGGLHGVGASVVNALSSYCRVEVKKNGGVYEQEYKCGIPQFDVRRIGDTTAHGT
TTTFKPDGTIFQDTTEFSFDYLCSRLRELSFLNKGICIRLVDEVKDKSEEFKYEGGLVSF
VEYLNRSKVVIHPKPIYMNVDKDETIIEIALQWNDSYSESVYSYANNINTAEGGAHLTGL
RGALTRVVNQLASNDKAVQNLKEGLSPEDIREGLTGVVHVKLRDPQFEGQTKNKLANSRI
RTLVESSLNEKLSDYFHENPDVAKKIVSKIVDAARARIAARKAKELTRRKSALDLGGLPG
KIADCQDRDPANCELFIVEGDSAGGSAKQGRDRKTQAVLPLKGKILNVEKATTDKMLSNQ
EIRLLVQALGTGIGRHDNDVDISKLRYHKIVIMTDADVDGAHIRTLFLTFFYRQMKEVIK
RGHLYIAQPPLYRYKKSKIEHYLKDEGALDKFLVETSMQDAVIIDANEKTLELSVVKNML
SCVERRNRITNILARRRSSVVVNYLANYTKLTPEIFYNKTEFENFVEELKLHVLKYGHVY
AKVDFDNEHNRYYAILDIQLSGKPYHFKLDFDFISSSEFEELKRLSMQLDSTFSLPLKYS
HDKKAKIIPSWVDLREFLLSEGKSGAYIQRYKGLGEMNAEQLWETTMKPSTRQFLQVTIE
DAMAADDIFSMLMGDDVPPRKEFIESNALNVRNLDA
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atgtttaataaatccaatttattcgtttgcgatccaggaaattatgaaaaaaaagatgac
ggatatggttcttcaaatatcactgttttggaaggattagaggccgttcgtaaacgtcct
gggatgtacattggcaacacaggcacagtaggtcttcaccatttgatttatgaagtggtt
gacaactctattgatgagtttttagcgggtcatggatctcaaattgaaatcaccctacat
ctcgatggaagcgttactgttgccgacaatgcgcgtgggatacctgttgataaacatcct
tcaggaaaaagcgcacttgaagttgttatgacaattcttcatgcgggcggaaaatttgat
aatgaaatttataaaacttcaggcggtttgcacggtgtgggtgcttctgtagtaaatgct
ttatcgagttattgccgcgtagaagtgaaaaaaaatggcggcgtttatgagcaagaatac
aaatgtggtattcctcagtttgatgtacggagaataggcgacacaacagcccatggcaca
acaacaacattcaaacccgatggcactatttttcaagatactaccgaatttagttttgat
tatttatgctcacgacttcgtgaattatcctttttaaacaaaggaatttgtatacgactt
gttgatgaagtcaaagataaatctgaagagtttaaatatgaaggcgggcttgttagcttt
gttgaatatttaaatagaagtaaagtggttattcatcctaaacctatttacatgaatgtt
gataaagacgaaactatcattgaaatcgcattgcagtggaatgacagttattccgaaagt
gtttattcctatgcaaataacataaatacagcggaaggtggcgctcaccttacaggattg
agaggcgccttaacgcgtgttgttaatcaattagcttcaaatgacaaagctgttcaaaat
ttgaaggaaggattatctcccgaagacattcgtgaaggtttgacgggagttgttcatgtc
aaacttcgtgatccccagtttgaaggacagactaaaaataaacttgccaattcacggatc
agaacactagtagaaagctcattaaatgaaaaattgagtgattattttcatgaaaatcct
gacgtagcaaagaaaattgtatctaaaattgttgatgcagcacgtgctcgtattgcggca
cgtaaggcaaaagaattaactcgtagaaaaagtgcgctggatttaggcggacttcctggt
aaaattgcagactgccaagatcgcgatccggcaaattgtgagttgtttattgtggaaggg
gattctgcgggcggttcggcaaaacaagggcgtgatagaaaaacacaagctgtattgccc
ttaaaaggtaaaatattaaacgttgaaaaagcaactacagataaaatgctttctaaccaa
gaaatccgattgctagttcaagctttaggaacgggtattggacggcatgataatgatgtt
gatatttctaaacttcgctatcataaaatcgtcatcatgacggatgcggacgtggatgga
gcccatattcgaactttatttttaacctttttctatagacaaatgaaagaagttattaaa
agaggacatctttatatcgcccaaccacctttatatcgctataagaaaagtaaaatagaa
cattatcttaaagatgaaggtgctctcgataaatttttagttgaaacatctatgcaggac
gcagtaattattgatgctaatgaaaagacattagaattatctgttgttaaaaatatgctt
tcttgtgtcgaaagaagaaatcgtattacaaatattttagcacgtagaagaagttctgtt
gtagttaattatttagcaaattatactaaattaactcctgaaattttttataataaaaca
gagtttgaaaattttgtagaagaattaaaacttcatgttcttaaatatggtcatgtctat
gcaaaagttgattttgataatgaacacaatagatattacgctattttagatatacaacta
tctggtaaaccttatcattttaaattagattttgacttcattagttcgtcagagtttgaa
gagttgaaaagactttctatgcaattagattctactttctctcttcctttaaagtattct
cacgataaaaaagctaaaataatcccatcttgggtagatttaagagaatttttactttca
gaaggtaaaagtggagcgtatattcagcgctataaaggtcttggtgaaatgaatgcggaa
caattgtgggaaacgacaatgaagccttctacaagacaatttcttcaggttacaattgaa
gatgccatggctgctgatgatattttttctatgcttatgggtgacgatgttcctccaaga
aaagaatttattgaatcaaacgctttgaatgtcagaaaccttgacgcttaa
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