Silvanigrella aquatica: AXG55_01715
Help
Entry
AXG55_01715 CDS
T09772
Name
(GenBank) hypothetical protein
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
saqi
Silvanigrella aquatica
Pathway
saqi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
saqi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AXG55_01715
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
saqi03019
]
AXG55_01715
03009 Ribosome biogenesis [BR:
saqi03009
]
AXG55_01715
Enzymes [BR:
saqi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AXG55_01715
Messenger RNA biogenesis [BR:
saqi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AXG55_01715
Ribosome biogenesis [BR:
saqi03009
]
Prokaryotic type
rRNA helicases
AXG55_01715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
PhoH
P-loop_SecA
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
APJ02712
UniProt:
A0A1L4CXM9
LinkDB
All DBs
Position
392899..394329
Genome browser
AA seq
476 aa
AA seq
DB search
MNNQSLQLAKYLEILGIEKLTKIQTLCIEPIYNNNSVFALAPTGSGKTLAFILPLFLKIN
IEEREHQTLILVPTRELGNQIAHVANKVASAIYSTDNKNILVRTAFGGTPIGAQIEELSK
KPHVIIGTPGRIIDLLERDAISLNHLKNLVLDEADIMVGMGFSDQVEEICNYLPIEIQVG
LFSATKNEKVSIIEKMILKNAKYMTVQNDIESNQSDDHQLAAQISHYYMTSHKEEKYNTL
KKLLKNTEKNDVNKGIIFCHTRETSHQLAESLKKEGFQAEALTGELGQVHRNSIMRNFKT
GNLKFLVATNIASRGIDVSKLPIVIHYDIPYTNEEYIHRSGRTGRAGNSGVSVALCEEKN
LGYYLNMMKELGISAKSYNYHSDNVSEKSHKISENEQTNRIRFIKMYVNKGKQDKMRPGD
ILGAFINELSFTKEDIGNIFIFDNFTHVEVNENKKEVLKKAKFKIKNLQVKISEAK
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgaacaatcaatccctgcagctagcaaaatatttagaaattttaggaatcgagaaatta
actaaaattcagacattatgcatagagccaatctataataataattctgtttttgctctt
gcgccaacaggatctggaaaaacattggctttcatattgccgctatttttaaaaataaat
atcgaagagcgtgagcatcaaactcttattttagttcctacgagggaacttgggaatcaa
attgctcatgttgcaaataaagtggcaagtgcaatttattctactgataataaaaatatt
ttagtgcgcacggcatttggaggaactccaataggggctcaaattgaggaactctcaaaa
aaacctcatgttattattgggactcctggaagaatcattgatttattagagcgtgatgcc
atttcgttaaatcatttaaaaaatctagttttagatgaagctgatattatggtaggtatg
ggtttttccgatcaagtagaagaaatatgtaattatctgcccatagaaattcaggtaggt
ttattttctgcaacaaagaatgaaaaagtatctataattgagaagatgatattaaaaaat
gcaaagtatatgactgtgcaaaatgatatcgaatcaaaccagagtgatgatcatcaacta
gcagctcaaatttctcattattatatgacatctcataaagaagaaaagtataatacgctc
aaaaaattattgaaaaatacagaaaaaaatgatgttaacaaggggatcattttttgccat
acaagagaaacttcacatcagttagcagaatctttgaaaaaagaaggctttcaagcagag
gctcttacaggtgagttggggcaggttcatcgtaatagtattatgcggaactttaaaaca
ggaaatttgaagtttctagttgccacaaatattgcatctcggggtatagatgtctccaaa
ttgccgatagttattcattatgacattccttatacgaatgaggagtatatccatcgttca
gggcgcacagggcgtgcggggaattcgggcgtatcggttgcattatgtgaagaaaagaac
ttgggatattatctaaatatgatgaaagaacttggaatttctgcaaaatcatataattat
cattcagataatgtatctgagaaatctcataaaatttcagaaaatgagcaaacaaataga
attcgttttattaaaatgtatgtgaataaaggcaagcaagataaaatgcgcccaggagat
attttaggcgcttttatcaatgaactttctttcactaaggaagatattggtaatatattt
atttttgataactttactcatgttgaagtgaatgaaaataaaaaagaagtattaaaaaaa
gcaaaatttaaaattaaaaatttgcaagtaaaaatatcggaagcaaagtaa
DBGET
integrated database retrieval system
