KEGG   Silvanigrella aquatica: AXG55_01785
Entry
AXG55_01785       CDS       T09772                                 
Name
(GenBank) RNA polymerase subunit sigma
  KO
K02405  RNA polymerase sigma factor FliA
Organism
saqi  Silvanigrella aquatica
Pathway
saqi02020  Two-component system
saqi02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:saqi00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    AXG55_01785
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    AXG55_01785
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:saqi03021]
    AXG55_01785
  09183 Protein families: signaling and cellular processes
   02035 Bacterial motility proteins [BR:saqi02035]
    AXG55_01785
Transcription machinery [BR:saqi03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     AXG55_01785
Bacterial motility proteins [BR:saqi02035]
 Flagellar system
  Flagellar assembly proteins
   Stator
    AXG55_01785
SSDB
Motif
Pfam: Sigma70_r4 Sigma70_r2 Sigma70_r4_2 Sigma70_r3 UPF0122 Aip3p_Bud6_N PhyR_sigma-like GerE
Other DBs
NCBI-ProteinID: APJ05041
UniProt: A0A1L4D4A7
LinkDB
Position
409042..409743
AA seq 233 aa
MRNQIIMDYAPLIKYIAQKIAARLPSNIDLDDLFSAGVIGLMDAIDKYDPSRDNKFKTYA
EFRVRGAMLDELRNQDWVPRSVRESNKKEDKAKLELEHRLRRPATEREVADYLEVPLEEY
QERMGRTRVSMMSLEELGGTHTSDKKSLLDCLENPNSKNPFMQLKNKGVRDIIMKTVEEL
PEKQKLVLSLYYYEDLNLKEIGRILDVTESRVSQLHTQAVQKMKLKLRHLLQE
NT seq 702 nt   +upstreamnt  +downstreamnt
atgcgtaatcaaattattatggattatgctcccttgattaaatatattgcacagaaaata
gcagccaggcttccgtcaaatattgatttagatgatttgttctctgcgggtgtcataggt
ttaatggatgctattgataaatatgatcccagtcgggataataagtttaaaacatacgcg
gagtttcgtgtgcgtggcgccatgcttgatgagttgagaaatcaggattgggtgccacga
agcgtgcgtgaaagtaacaaaaaagaagacaaggcaaaattagaacttgagcataggtta
agacgacctgctaccgagcgtgaagttgccgattatttagaagttcccctcgaagaatac
caagagcgtatgggacgtacccgtgtttccatgatgagtttagaagaattaggaggaact
catacaagtgacaaaaaatcgttactcgactgcttagaaaatccaaattctaaaaatccc
tttatgcaattaaaaaataagggagttcgtgatatcattatgaaaacagtagaggaatta
ccagaaaaacaaaaattagtattgagtctttattattatgaggacttaaatttaaaagaa
attggccgaatattagatgttacagaatctcgtgtgtctcagcttcatactcaggctgtt
cagaagatgaagttaaagttgcggcaccttttgcaggaatga

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