Silvanigrella aquatica: AXG55_02775
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Entry
AXG55_02775 CDS
T09772
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
saqi
Silvanigrella aquatica
Pathway
saqi03030
DNA replication
saqi03430
Mismatch repair
saqi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
saqi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AXG55_02775
03430 Mismatch repair
AXG55_02775
03440 Homologous recombination
AXG55_02775
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
saqi03032
]
AXG55_02775
03400 DNA repair and recombination proteins [BR:
saqi03400
]
AXG55_02775
Enzymes [BR:
saqi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AXG55_02775
DNA replication proteins [BR:
saqi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AXG55_02775
DNA repair and recombination proteins [BR:
saqi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AXG55_02775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
GerA
tRNA_anti-like
T2SSK
DUF6821
hDGE_amylase
Motif
Other DBs
NCBI-ProteinID:
APJ02902
UniProt:
A0A1L4CY70
LinkDB
All DBs
Position
complement(634505..638161)
Genome browser
AA seq
1218 aa
AA seq
DB search
MQQIEEFVHLHIHSEYSLLDGSIKVKKLVKELSKQGYTAAALTDHDGMHGVLEFYLACQA
EKINGIIGYEINVEPLYLEDKKQVGHLILLAENELGYSNLIKLCTIANTSGKNALFTDST
NVTWEELNKHSAGIICLTSCIKGELSRLVLNNNDENSILYLKNLSDVFGSNNVFVELIDN
GIPEQKNLIKQLSLVAEKLNLETVATADVHYLYKKDKETHMSLLAIKNKLQKSEVKGIPN
EIEFHLTTKEEMIEKFSKYPKALLNTKIIAERCHVKIDTKSVFMPDYRQRENETSDDCLV
RLSWEGLEARKTAVSSWMGEKFNDDVWEEYKKRLEYELSVILKMKFSGYFLIVQDFINWA
KINNIPVGPGRGSAAGSLVTYALRITNIDPIRFNLLFERFLNPERISMPDIDTDFCQDRR
GDVLNYVYQKYGNRAVSQIVTFGRMMAKNALKNLARINGWSFHDSNEFAKLIPESPGITL
EQAIKEEEKIRERIESDERARNLWEGALEVEGTLSSLGIHAAGVIISDRALDERCPLLET
EGQLLTQFENKYAEKIGLIKFDFLGLKTLTVIDNAVKLIHKQKDPDLDIERIELEDKKVY
EMISTAHVTGIFQLESTGMRKLIADLKPTCFTDIIAVLALFRPGPLGSGMVEDFVKRKHG
ETQVEYPFPELEPILGDTYGVIVYQEQVQKIAAVLANYSLGEADLLRRAMGKKDKNEMEK
QKSRFVSGATENKHDPQKSAELFDLMAMFAEYGFNKSHTAAYGWVTYQTAWLKTYYPTEF
MTAIMTCDLDNTDKIVGYVRDCKRMKIKIRPPCVNHSRFEFSIPGEKIIQFGLGAIKGLG
SGIIQMIVQEREKGGSFATVPEFIARLDARKLNKKVMESLIKAGAFDAMATNRAELLANS
DSWLRTIAKETEREENTGYDIFGIFETPQTKVAEAKKQKLTSNSPQATKNKFEFCPLALP
TQVRTEQCAKRILNHLIAIQVKETKPWNFQEQLSHEFVTLGFYMSGHPADLLREDLKEIT
EISLDQAPLYIEPDNIPDYKRKTIKIAGIVTMVMEKKNKEGNAFLVLKIEDGFGELEVTL
FSKQYSALTTPIKMGEALILECKIKKGIEEGSVKGVVQSFDRVSNKRIELVKRIVLNTDE
SFLKEFNNFKLLENILKKNQGETPLFLNVFIPEQNMLIKAKLGNHYISPSDIFIMDIENT
WPGVVKVERLYQLPIQHV
NT seq
3657 nt
NT seq
+upstream
nt +downstream
nt
gtgcagcaaatagaagagtttgtccacctccacattcactctgagtactctctcctcgat
ggctccatcaaagtcaaaaaactcgttaaagagctgagcaaacaaggctatacagcggcg
gctcttacggatcacgatgggatgcacggtgttcttgaattttatcttgcctgccaagca
gaaaagatcaatggcatcattggctatgaaataaatgtagagcctttatatcttgaagat
aaaaaacaagtaggacatttaatattattagcagaaaatgagcttggttattcaaatctc
attaaactctgcacaattgcaaatacctctggaaaaaatgccctttttaccgattctaca
aacgtaacatgggaagaactaaataaacactccgcaggaattatttgtttaacaagctgc
ataaaaggtgaattatcccgcctagtattaaataataacgacgaaaattcaattttatat
ttaaaaaacctatcggatgtttttggttcaaataatgtttttgtagaacttattgataac
ggaattccagagcaaaaaaacttaatcaaacaactttcactcgtagctgaaaaattaaat
ttagaaaccgttgctacagctgatgtgcattatctttataaaaaagataaagaaacacat
atgtctcttcttgcaatcaaaaataaattacaaaaatctgaagtcaaaggaataccaaac
gaaattgaattccatttgacaactaaagaagaaatgatagaaaagttttctaaatacccc
aaagcattattaaatacaaaaataattgccgagagatgtcatgtaaaaatagatactaaa
agcgttttcatgcccgattaccgacaacgtgaaaatgaaacttcagatgactgtcttgtg
cgtctttcttgggaaggacttgaagctcgaaaaaccgctgtttcctcttggatgggtgaa
aaatttaatgatgatgtttgggaagaatataaaaagcgcctagaatatgaactatctgta
attttaaaaatgaaattttcaggatactttttaattgtccaagactttatcaattgggct
aaaataaataatattcccgtaggacctggtcgtggatcggccgctggaagtcttgttact
tatgcgttacgtattacaaatatagaccccattcgttttaatttgctatttgagcgtttt
ttaaatccggaacgtatttctatgccggatattgataccgacttttgccaagacagacgc
ggtgatgtcctaaactatgtttatcaaaaatatggcaaccgagcggtttcacaaattgtg
acttttggccgaatgatggctaaaaatgctttgaaaaatttggcacgtatcaatggctgg
tcttttcatgacagtaatgaattcgccaaacttattcccgaatcacctggaattaccctt
gaacaagctataaaagaagaagaaaaaataagggaacgaatagaatccgatgaacgagcg
cgcaacttatgggaaggcgctttagaagtcgaaggaactttgagctcattgggcattcat
gcggcaggtgtgattatttccgatcgcgccctagacgaacgttgccctttactggaaaca
gaagggcaacttttaactcaatttgaaaataaatatgctgagaaaattggacttattaaa
tttgactttttaggactaaagactcttactgttattgataatgctgtaaaactcattcat
aaacaaaaagatcccgatcttgatatcgaacgcatcgaactggaagacaaaaaagtctac
gaaatgatttccacagctcatgtgacaggcattttccagcttgagtccactggtatgcgc
aaactcattgcagatttaaaacccacttgttttacagatattattgctgttctcgccctt
tttcgccccggtcccttaggctcaggcatggtggaagatttcgtgaagcgcaaacacggc
gaaacccaagttgagtacccctttcccgaactggaaccgattttaggcgatacttacggg
gttattgtttaccaagaacaagtgcaaaaaattgctgccgtgcttgcaaattatagcttg
ggagaagcggacttattgcgtcgcgccatgggtaaaaaagacaaaaatgaaatggaaaag
caaaaaagccgatttgtttctggcgccaccgaaaataaacatgacccacaaaaatcggcg
gaacttttcgaccttatggccatgttcgcagaatatggatttaataaaagtcacacggct
gcatatggttgggtaacatatcaaacagcatggcttaaaacgtattatcccacagaattt
atgaccgccataatgacctgtgacttggataacaccgataaaattgtcgggtatgtacgc
gattgcaagcgtatgaaaatcaaaattcgaccaccctgcgtcaatcactcgcgctttgaa
ttcagcattcctggagaaaaaattatccaattcggcctcggggctattaaaggacttggt
tctggcatcattcaaatgatcgtgcaagaacgagaaaaagggggatcttttgccacagtt
cccgaatttatagcacgccttgatgcacgcaaacttaataagaaagtcatggaaagtctc
atcaaggcaggagcttttgatgccatggcaaccaatcgcgctgaacttttagcaaattca
gactcttggttacgcaccatcgcaaaggaaacagaacgtgaggaaaatacaggctatgat
atttttggtatttttgaaacaccgcaaacaaaagtagctgaagcaaaaaagcaaaaatta
acttcaaattctccacaagccacaaaaaataaatttgaattttgtcccttagcattacca
acacaagtcagaacagaacagtgtgctaagcgaatattaaatcatttgattgctatccaa
gttaaagaaacaaaaccatggaattttcaagaacaattaagccatgaatttgtaaccttg
ggtttttatatgtcaggacatcctgccgatctcttaagagaagacttaaaagaaataaca
gaaatttcactcgatcaagcaccactatacattgaaccagacaatattcccgattataaa
cgcaagacaattaaaattgcgggcattgttaccatggttatggaaaagaaaaataaagag
ggcaatgcttttcttgtcctaaaaatagaagatggatttggagaactggaagttacatta
tttagtaaacaatattctgccctaacaacacctataaaaatgggtgaagctcttatttta
gaatgcaaaattaaaaaaggaatagaagaaggcagtgtaaaaggtgtggtacaaagtttt
gatcgcgtatcgaataaacggattgaactcgttaaacgaattgtattaaatacagatgaa
agtttcttaaaagaatttaataattttaaattacttgagaatatcttaaaaaagaatcaa
ggtgaaacgcctttatttctaaatgtatttattcctgagcaaaatatgcttataaaagca
aaacttggtaaccattacattagcccttcagatatttttattatggatattgaaaatacc
tggccaggcgttgtaaaagttgaacgtttatatcaacttcccattcaacatgtctag
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