Silvanigrella aquatica: AXG55_06065
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Entry
AXG55_06065 CDS
T09772
Name
(GenBank) hypothetical protein
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
saqi
Silvanigrella aquatica
Brite
KEGG Orthology (KO) [BR:
saqi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
saqi03400
]
AXG55_06065
Enzymes [BR:
saqi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
AXG55_06065
DNA repair and recombination proteins [BR:
saqi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
AXG55_06065
Prokaryotic type
AXG55_06065
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Lys_Orn_oxgnase
Motif
Other DBs
NCBI-ProteinID:
APJ03493
UniProt:
A0A1L4CZW1
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Position
1448380..1449792
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AA seq
470 aa
AA seq
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MEFNNSIVWFRRELRFVDNAALDKACLCSKTIVPVFIFDTKILSTLVDKQDKRVYFIFES
LKEMEEELKTYGKSLVVRIGDPTVEIPKLAQEFKADCVFTSNDYENYSIQRDYKVKTKLK
DLNIQFISVKDQVIFEGTEVVKQNNLPYVVYTPYKNEWLKKAHENDFNCYSFDFKKFINK
ENIHTVPFSWKLTEVGFSPATLWLATGRKGALEKIKQFISKINDYSENRDYFSNNDTSNL
SVHLRFGTISIREAFRFAFQYKSKGAEIWINELIWREFYKMILSEFPHVESMPFKKDLKD
IPWENNEEFFEKWTKGQTGFPIVDAAMRHLNETGWMHNRLRMIVASFLTKDLLIDYRKGE
QYFAEKLLDYDLSSNNGGWQWSASTGCDAQPYFRVFNPESQSLKFDPEGKFIRKLCPELS
HLDNKNIHTPYKVTWNLFSHHKNSGDLSYPKPIVEHDQQRLKAIAMFKKS
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atggaatttaataattcaatcgtttggtttcgtcgtgaattgcgttttgttgataatgct
gcattagataaagcttgtttatgctccaaaaccattgttcctgtttttatttttgataca
aaaatattgtcaacactggttgataagcaagataaaagagtttattttatttttgaatct
ttaaaagaaatggaagaggagcttaagacatatggaaaatcattagtcgtacgtattggt
gatcctactgttgaaattccaaaattagcgcaagaatttaaagcggattgcgtttttacg
agtaatgattatgaaaattattcaattcaaagagattataaagttaaaacaaaattaaaa
gatttaaatattcaatttatttctgttaaagatcaagttatttttgaaggtaccgaagtt
gtaaagcaaaataatcttccttatgtggtttatactccttacaaaaatgaatggttaaaa
aaagcccacgaaaacgattttaattgttattcttttgattttaaaaagtttattaataaa
gaaaatattcatactgttcccttttcatggaagttaacagaagtgggtttttcgcctgcc
actctttggttagcaacaggaagaaagggtgctcttgaaaaaataaagcaatttatttct
aaaataaatgattattctgaaaatcgggattatttttcaaataatgacacctcaaatctt
tcagttcatttgcgatttggtacgatctcaattcgagaggctttccgttttgctttccaa
tataagtcaaagggagctgaaatatggattaacgaactcatctggcgtgagttttataaa
atgattttgtctgaatttcctcacgttgaaagtatgccttttaaaaaagatcttaaagat
attccctgggaaaataacgaagagttttttgaaaaatggacaaaaggacagacaggattt
cctattgtcgatgccgccatgagacatttaaatgaaacaggttggatgcacaatcgtttg
cgcatgatcgtggcatcttttttaacaaaagatttgcttatcgattatagaaaaggtgag
cagtattttgctgaaaagcttctggattatgatctgtcttcaaataatggggggtggcag
tggtctgcctctacaggttgtgatgcacaaccttattttcgagtatttaatcctgaatct
caatcacttaagtttgatcctgaaggcaaatttattcgtaaattatgccctgagctcagt
catttagataataaaaatattcatactccctataaagtgacttggaatcttttttcgcat
cataaaaattctggagatttatcctatcccaaacctattgtagagcatgatcaacaaaga
ttaaaagcgatcgctatgtttaaaaaaagttaa
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