Silvanigrella aquatica: AXG55_06320
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Entry
AXG55_06320 CDS
T09772
Name
(GenBank) hypothetical protein
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
saqi
Silvanigrella aquatica
Brite
KEGG Orthology (KO) [BR:
saqi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
saqi03009
]
AXG55_06320
Enzymes [BR:
saqi01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
AXG55_06320
Ribosome biogenesis [BR:
saqi03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
AXG55_06320
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAM
Cons_hypoth95
PDGF
Motif
Other DBs
NCBI-ProteinID:
APJ03540
UniProt:
A0A1L4D031
LinkDB
All DBs
Position
complement(1514451..1515866)
Genome browser
AA seq
471 aa
AA seq
DB search
MQKYRNRQKSFAHNNSQQNTQKKFDKETVTAFALSTDGRAIGRSNDNIVVFIKDLLPDET
AKVEIVSKKSNYKNAIISKIETPSPHRVSPPCIYTSQCGGCQLQHISQNMQTEFKTKWFL
ETLKRIGKWNDRFLKEAESLISIIFLKREYYRRRIRLHFDGKNLGFKASNSNNVTNIEHC
LITSEKINQKIKFVKENLLKSFKEIQDKKLSKHIECEIEVTESDDEKVILHIANFNMDSP
IEKNNVIKMIERNLEISNDQTIHLKHPELPRFKIKKQSFVQPHLDCIKLYYQHIQDNIDQ
FIQKYFAKSNIKILAWDLYCGAGVFTSLPYFSGKRNNVEVECVGVEGIKEAIDSLNSNHK
NLPIQGIVKDVEQFIEEQFQLKLSNPNEFKGVNVVILDPPRSGCGIAIMQKIVEICNKKA
LITYLACDPASFARDTRVLLEGGFKLKSLCLFDSFGHTTHYEVLGCFEKSN
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagtatcgtaacagacaaaagtccttcgctcacaacaactctcaacaaaatact
caaaaaaaatttgataaagaaactgtgacggcatttgctttatccacagatggaagagct
ataggcagaagcaatgataatattgtcgtatttattaaagatttactcccagatgaaact
gctaaagttgaaatagtttctaaaaaatctaactataaaaatgccatcatttcaaaaatt
gaaacaccttctccacatcgcgtttctcctccttgtatttatacaagtcaatgcggtggt
tgccaattacagcatatttcacaaaatatgcaaacagaatttaaaacaaaatggttttta
gaaactttaaaaagaattggtaagtggaatgatcgcttccttaaagaagcagaatctctt
atttccattatttttttaaagcgagaatattatagaagaagaattcgattgcattttgat
ggaaaaaacttaggatttaaagcttccaactcaaataatgttacaaatattgaacactgc
ttaatcacctccgaaaaaataaaccaaaaaataaaatttgttaaagagaatttactgaaa
tcatttaaggaaattcaagataaaaaattatcaaaacatattgaatgtgaaattgaagtc
acagaaagcgatgatgaaaaagtcattttacatatcgcaaactttaatatggattcccca
attgaaaaaaataacgtcataaaaatgattgaaagaaatttagaaatttccaatgatcaa
acaattcatttaaaacaccctgaactcccacgctttaaaattaaaaaacaaagttttgtt
cagccacatttagattgtataaaactttattatcagcatattcaggacaatatcgatcaa
tttattcaaaaatattttgcaaaatctaatattaaaatattagcttgggatttatattgt
ggtgccggggtgtttacttcactcccctatttttcaggcaaaagaaacaatgtggaagtg
gaatgtgttggtgttgaaggcataaaagaagctattgattctctcaatagcaatcacaaa
aatttaccaattcaaggaattgtaaaagatgttgaacaatttattgaagagcaattccaa
ttgaaactttcaaaccccaatgaatttaagggcgtgaacgtcgttattttagatcctccg
cgaagtggttgtggcattgcaataatgcaaaagattgttgaaatttgtaataaaaaagca
cttattacttatttagcatgtgatcccgcaagttttgcaagagacacgcgcgtcctttta
gaaggtggatttaagttaaaaagcttgtgtttatttgattcttttggccataccacgcat
tatgaagtcttaggctgctttgaaaaaagcaactga
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