Silvanigrella aquatica: AXG55_06685
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Entry
AXG55_06685 CDS
T09772
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
saqi
Silvanigrella aquatica
Pathway
saqi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
saqi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AXG55_06685
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
saqi03400
]
AXG55_06685
Enzymes [BR:
saqi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
AXG55_06685
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
AXG55_06685
DNA repair and recombination proteins [BR:
saqi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AXG55_06685
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Rep_fac-A_C
Motif
Other DBs
NCBI-ProteinID:
APJ03608
UniProt:
A0A1L4D085
LinkDB
All DBs
Position
1602972..1603787
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AA seq
271 aa
AA seq
DB search
MPELPEVQNFVNALNKSYAGLKIKEIQFHRENLRYPFQKKELFKIFSQGNFFQRCYREGK
QMVLETSQGSVHVSLGMSGSFKPILSKSLEKHQHVSLYFENGEGLAYVDPRRFGFWIIKQ
EIDSETSSCDPLNKNELEILFLSEEVMQKRVTVKDLLMDQKIIGGIGNIYAVEALFHAKI
SPLKLCYEVSLQKWKDLAQVIPQILEQAIHLGGSSISTYRSLNGNKGSFQDVHQVYGRES
QACLKNDCKGTIKRIVQKGRSTWFCSLCQKN
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgccggagttgcctgaagtacaaaattttgtgaatgcattaaataaatcatatgcggga
cttaaaataaaagaaatacagttccatcgtgaaaatctacgctatccttttcaaaaaaag
gaactttttaaaatattttcacaggggaatttttttcagcgctgttaccgtgaagggaag
cagatggttttagagacgtctcaaggatccgtccatgtgagcctagggatgagtggttct
tttaagcctattctttcaaaatcattagaaaaacatcaacatgtctcactgtattttgaa
aatggggaaggcttagcttatgtcgatcctcgtcgatttggtttttggataataaaacaa
gaaattgattctgaaacttcttcatgtgatcccttaaataaaaatgaattagaaatcctc
tttttatcagaagaagtcatgcaaaaaagagtgactgtaaaagatttactgatggatcaa
aaaataattggagggattggaaatatttatgctgtagaagctttatttcatgcaaaaatt
tccccattaaaattatgttacgaagtttctctgcaaaaatggaaagatctggcacaagtt
attcctcaaattcttgagcaagcgattcatttgggtggttcaagcatttctacttatcgt
tctttaaatggcaataaaggctcttttcaagatgttcatcaggtgtacggacgtgaatca
caagcttgtttaaaaaatgattgtaaaggaactatcaaacgtattgtgcaaaaagggcga
agcacttggttttgttctttatgccaaaaaaattaa
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