Silvanigrella aquatica: AXG55_08355
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Entry
AXG55_08355 CDS
T09772
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
saqi
Silvanigrella aquatica
Pathway
saqi00300
Lysine biosynthesis
saqi00470
D-Amino acid metabolism
saqi01100
Metabolic pathways
saqi01110
Biosynthesis of secondary metabolites
saqi01120
Microbial metabolism in diverse environments
saqi01230
Biosynthesis of amino acids
Module
saqi_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
saqi00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
AXG55_08355
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
AXG55_08355
Enzymes [BR:
saqi01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
AXG55_08355
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GFIT
Motif
Pfam:
DAP_epimerase
Pro_racemase
Motif
Other DBs
NCBI-ProteinID:
APJ03914
UniProt:
A0A1L4D152
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Position
complement(2011611..2012630)
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AA seq
339 aa
AA seq
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MDQPDFEFDFEKLHGASNDFIFIPHPILINFKSQLELKNFVKNICHRNQGIGADGVVFYD
LGKDKSKNKSNENLNQIKIFIVNSDGSYAGTCGNALRCLGFKLLRDKEWDGKTELPIYRL
FPKHFSQNLNLISSDESFVLQTNSFAILNNATLDSVITATVHVAMGKEVNTKATPILENA
LAQFGNTLDFLTPIYVELSNPHWIFISPNFQHFNRREFKEFGLFAQGELRSKSLEGEVPL
ANIGMITLQQKNSLQWNLVVFERGAGLTQCCGSGAVAARIALEYSGFVSQEVSDVSFQMP
GGLVSISKPLNRGDETAQRVLKGPAHWVFKGNGLHRPNQ
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
gtggatcaacccgatttcgaatttgattttgaaaaactacatggcgcatctaacgatttt
atttttatacctcatcccattttaataaattttaagagtcaactcgaacttaaaaatttt
gtgaaaaatatatgtcatcgcaatcaaggaattggtgccgatggcgttgttttttatgat
ttaggcaaagataaatctaaaaataaaagcaatgaaaatttaaatcaaataaaaattttc
attgttaattccgatggcagttatgcaggaacctgtggcaatgctttgcgctgcttagga
tttaaattattacgtgataaagaatgggatgggaaaactgaattacctatttatcgttta
tttccaaaacatttttcacagaatctgaatttaatttcttcagatgaaagctttgtttta
caaacaaattcttttgctattttaaataatgcgactttagattccgtgataacagctaca
gttcatgttgctatgggtaaagaagtaaatacaaaagctacgccaattttagaaaatgcc
cttgctcaatttggaaatactttagattttctaactcccatttatgttgaactctctaat
ccgcattggatatttatttcaccaaattttcaacattttaatcgaagagaattcaaagaa
tttggcttatttgcccaaggtgaattgcgatctaagtcgttggaaggagaagttccttta
gcaaatattggaatgataacgctacaacaaaaaaattcattgcaatggaatttggttgtg
ttcgaaagaggagcgggattaacgcaatgttgtggttcaggtgctgtggcagcgcgtatt
gccctagaatattcaggttttgtttctcaagaagtttcagatgtttcttttcaaatgcca
ggcggtttggtttctatttctaaacctttaaatagaggtgatgaaacagcacaaagagtt
ttaaaggggcctgcacattgggtttttaagggaaatggacttcatcgtcccaatcaataa
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