Silvanigrella aquatica: AXG55_08580
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Entry
AXG55_08580 CDS
T09772
Name
(GenBank) tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
saqi
Silvanigrella aquatica
Brite
KEGG Orthology (KO) [BR:
saqi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
saqi03016
]
AXG55_08580
Transfer RNA biogenesis [BR:
saqi03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
AXG55_08580
Prokaryotic type
Methyltransferases
AXG55_08580
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
DO-GTPase2
AIG1
Dynamin_N
RsgA_GTPase
SGTA_dimer
Htt_C-HEAT
SRP54
Roc
ABC_tran
TiaS_TCKD
Motif
Other DBs
NCBI-ProteinID:
APJ03958
UniProt:
A0A1L4D191
LinkDB
All DBs
Position
complement(2055024..2056508)
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AA seq
494 aa
AA seq
DB search
MSSSFDSIFALASPSVRSAIHLHRISGRNLIKIISPYIFSPNGKNIYKLNYFSDMPQDKP
LSRYVLIKDQNGEMIDDVILTYFPAPKSYTGEDVIEISVHGNPLISAKLHSLLRNIGMRD
AEPGEFTQRAVLNGKLDLAQAEGINQLIHTETLGGIHLARNTVDGVLSKETEDIREQLIG
ILSYLEAHIDFAPDEVGDYDPVSLLPQMKNAIKRLEILLGTYSSGLKLREGIKVALVGKP
NAGKSSLYNSLLRYDRAIVTNIPGTTRDVLEDRLVIQNKDFVLIDTAGIRHTSDTVEKMG
VERSLKTVAIADIICLVINIENIQQENINNYILSELNQFIHEVNIHSNQKILVVISKKDL
LLKKDIHSLQWLDENSILNIDKKFNMNCLIQKFIFTSIDDNESLSQELVNLHNEMTGQLA
KKENPALISTRQKDKVEIAIKCLNEAIELVEQKDYPEKISSIINQSRQSLQEIVGEIHLD
NVLEKIFSTFCIGK
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
ttgagttcaagttttgattctatttttgcattagcttccccttctgtgagaagtgctatt
catcttcatcgtatttcagggcgaaatttaataaaaataatttcgccttatattttttca
ccaaatggaaaaaatatttataaattaaattatttttctgatatgccgcaggacaaacct
ttgtcacgttatgttttgattaaagatcaaaatggagaaatgattgacgatgttatttta
acctattttcccgcaccaaaaagttatacgggcgaagatgtcattgaaatttcggtacat
ggaaatccattaatttctgcaaagttacacagtttattacgtaacataggaatgcgagat
gccgagccaggtgaatttacccaacgcgctgtgttaaatggaaaattggatttagctcag
gcagaaggtattaatcaattgattcataccgaaaccttgggaggaattcatcttgcaaga
aatacagttgatggtgttctctctaaggaaacagaggatattcgcgaacaattgattggt
attttatcttatttggaagcacacatcgattttgctcccgatgaagtaggggattacgat
cccgtatcactgctaccacaaatgaaaaatgcaattaaaagattagaaatattattgggt
acttattctagtggattaaagcttcgtgaaggaattaaagtggcgttggttggaaaaccc
aatgcgggaaaatcaagcttatataattccttgttacgatacgatagagctatcgtaaca
aatattccggggacaacccgagatgtgctagaagatcgccttgttattcaaaataaagat
tttgtcttaattgacacggcaggaattcggcatacttcagataccgttgaaaaaatggga
gtggaacgcagtctaaaaacagtagccattgccgatattatttgtttagttattaatatt
gaaaatattcaacaagaaaatataaataattatattttatcggaattaaatcagtttatt
catgaagtgaatattcattcaaatcaaaaaattcttgttgttattagcaaaaaagactta
ttgcttaaaaaagatattcattctttgcaatggttggacgaaaactcaatattaaatatc
gataaaaaatttaatatgaattgcctcattcaaaaatttatttttacttcaattgatgat
aatgaaagcttatctcaagagttggtcaatttacataatgaaatgacaggtcaattggca
aaaaaggaaaatcctgcgcttatctccacgagacaaaaagataaagttgaaattgctatc
aaatgtttaaatgaagcaattgaacttgtagaacaaaaagattaccccgaaaaaatttct
tccataataaatcaatcaagacaatctcttcaagaaattgtgggtgaaattcatttggat
aatgtcctcgaaaaaatattttccacattttgtattgggaaataa
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