Silvanigrella aquatica: AXG55_08860
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Entry
AXG55_08860 CDS
T09772
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
saqi
Silvanigrella aquatica
Brite
KEGG Orthology (KO) [BR:
saqi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
saqi03032
]
AXG55_08860
03036 Chromosome and associated proteins [BR:
saqi03036
]
AXG55_08860
03400 DNA repair and recombination proteins [BR:
saqi03400
]
AXG55_08860
DNA replication proteins [BR:
saqi03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
AXG55_08860
Chromosome and associated proteins [BR:
saqi03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
AXG55_08860
DNA repair and recombination proteins [BR:
saqi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
AXG55_08860
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-CCDC81_bac_2
HU-CCDC81_euk_1
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
APJ04010
UniProt:
A0A1L4D1E8
LinkDB
All DBs
Position
complement(2111706..2111987)
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AA seq
93 aa
AA seq
DB search
MVKSELIEILSSKADVTAPQAEELINMFFDTISEALTEDGRVEIRGFGAFTVRKYKSYDG
RNPKTGERIEVPEKKLPFWKTGLELRQRVDGLG
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atggtaaaaagtgaactaatcgaaatcctttcttctaaggcagatgttactgcacctcag
gcagaagaacttatcaacatgttttttgatacaatttctgaggcacttactgaggatggc
cgtgttgaaatccgcggttttggcgcttttactgttcgtaaatacaaatcttacgatggg
cgtaatccgaaaacaggtgaaaggatagaggtaccagaaaagaaacttcctttctggaaa
acagggcttgagttacggcaacgtgtggatggcttaggttga
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integrated database retrieval system
