Silvanigrella aquatica: AXG55_09620
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Entry
AXG55_09620 CDS
T09772
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
saqi
Silvanigrella aquatica
Pathway
saqi00550
Peptidoglycan biosynthesis
saqi01100
Metabolic pathways
saqi01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
saqi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
AXG55_09620
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
AXG55_09620
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
saqi01011
]
AXG55_09620
Enzymes [BR:
saqi01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
AXG55_09620
Peptidoglycan biosynthesis and degradation proteins [BR:
saqi01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
AXG55_09620
BRITE hierarchy
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
APJ04148
UniProt:
A0A1L4D1S5
LinkDB
All DBs
Position
complement(2272245..2274248)
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AA seq
667 aa
AA seq
DB search
MLDNRSKQESVSDPNRRNIIISCFLGITAAITARLWYLQIIKGSDFSVASARNRVREITR
PAPRGLIYDRYSKILLSNRLFFDLIVIPQYLQNRPKTLSIVSDLFHIPIAQIERKLLESQ
ANPKFVPVRIKRNLSLHEVATLESNKFFLPGVDVDSAPRRDYLGNESAHLFGYLGEVTSK
ELDILNSQVSSYQYRVGSIIGKAGIERKYERNLRGGEGREALLVDALGRLQPDSSLDIAL
NLSRPAQRGNDVYLTIDSELQNVATEAFRNKNGAVCALNPNNGEILVYLSNPNYKLSMYQ
DGLTMEDWQNLRSNPFKPLLDKVTGGAYPPGSTFKIIVAIAALEEGLITPDRKFNCPGYF
VLGNGRWKCWKHTGHGPVSMSTALQLSCDVYFYNVGNMVGIDRIAKWGRLFGLGERTGLD
LNMELSGISPSTEWKLRTKGLPWLSGDTINASIGQGFNLCTPIQILNAFAAVSNGGILYK
PHILKKIVDSQNKIIFEEKQTIIRQIKINPANLAVVKKGLQDVVEASDGTAKKARVEGFT
VSGKTGTAQTSALKFTKGVKQDDIAFKALDHAWFASYSPSDTPEIAVVVFSEYDGGGGGA
NAAPIAQQIIEAYWRKKFPQKFSKPTKTALTTEKLQSQQENQIDFGEQNANINREENNNM
NIPDELR
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atgcttgataatagatcaaagcaagaatcagtctcagatccaaatcgaagaaacattatt
atttcgtgtttccttggaatcactgcggccattacggcgagactttggtatttgcaaatt
ataaaaggatcggatttttcggttgcatcggcgcgcaatcgggtacgtgaaatcacacgc
ccggcgccgcgcggtttaatttatgatagatatagtaaaattcttctttccaacagacta
ttttttgatttaattgtcatcccacaatacttacaaaatagacccaaaacactttctatt
gtctccgatttatttcatataccgattgcacaaattgaaagaaaactattagaatctcaa
gctaaccctaaatttgtgcctgtaagaataaaaaggaacttgtccctacatgaggtagct
actctcgaatcaaataaattctttttacctggtgttgatgttgattctgctcctcgtcgt
gactatttagggaatgaatcggcacatttatttggctatcttggtgaagtaacatcaaag
gagcttgatatattaaattctcaagtttcaagttatcaatatcgagttggttccattatt
ggaaaagcaggaattgaaagaaaatatgaaagaaatttacgaggtggtgaagggcgtgaa
gcgttacttgtcgatgccttagggcgtttgcaacccgattcctcccttgatattgcttta
aatttaagtcgtcctgcacagcgcggaaatgatgtttatttaactattgattccgaatta
caaaatgtggcgactgaagcatttcgaaataagaatggtgctgtttgtgctcttaatcca
aataatggagaaattttagtttatttatcaaatccaaattataagctttccatgtatcaa
gatggtttaacaatggaagattggcaaaatttgcggtctaacccatttaaacccttacta
gataaagtaacaggaggtgcttatccaccaggatctactttcaaaattattgttgctatt
gccgctttagaagaaggtttaatcactcctgatagaaaatttaattgtcccggttacttt
gtattaggtaatggcagatggaaatgttggaagcatacgggacatgggcctgtgagtatg
tcaacagctttgcaattaagttgtgacgtttatttttataacgtggggaatatggttgga
attgatcgtattgcaaaatggggtagactctttggtttaggcgaacgcacaggactcgat
ttaaatatggaattatctggaatttccccttcaacagaatggaaactaaggacaaaaggt
ttgccctggttgagtggtgatacgattaatgcatccattgggcagggatttaatttgtgc
actcctattcaaattttaaatgcttttgccgctgtaagtaatggtggtattttatataaa
cctcatattttaaaaaaaattgttgatagtcaaaataaaatcattttcgaagaaaaacaa
acgatcattcgtcaaattaaaataaatccagctaatttagcggtagttaaaaaaggcttg
caagatgttgttgaagccagcgacgggacagcgaaaaaagcacgagtagaaggttttact
gtttcaggtaaaacaggtacggcacaaacatcggcacttaaattcacaaagggtgtgaaa
caagatgatattgcatttaaagctttagaccatgcttggtttgcatcctacagtcctagt
gatacgcccgaaattgctgttgttgtttttagtgaatatgatggcggtggtgggggagcc
aatgccgcacctattgcacaacagattattgaagcctattggcgtaaaaaatttccacaa
aaattttcaaaaccgacaaaaacagctttaaccacagaaaaacttcaatcacagcaagaa
aatcaaatcgattttggtgaacaaaatgcaaatattaatagagaagaaaataataatatg
aatatccccgatgaattgaggtaa
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