Silvanigrella aquatica: AXG55_10015
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Entry
AXG55_10015 CDS
T09772
Name
(GenBank) 23S rRNA (uracil-5-)-methyltransferase RumA
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
saqi
Silvanigrella aquatica
Brite
KEGG Orthology (KO) [BR:
saqi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
saqi03009
]
AXG55_10015
Enzymes [BR:
saqi01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
AXG55_10015
Ribosome biogenesis [BR:
saqi03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
AXG55_10015
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltransf_31
tRNA_U5-meth_tr
Methyltransf_15
Methyltransf_25
MTS
Cons_hypoth95
PrmA
Methyltransf_4
TRM5-TYW2_MTfase
Methyltransf_12
Methyltransf_11
Ubie_methyltran
PCMT
RrnaAD
TehB
Motif
Other DBs
NCBI-ProteinID:
APJ04222
UniProt:
A0A1L4D200
LinkDB
All DBs
Position
2359029..2360429
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AA seq
466 aa
AA seq
DB search
MNDNYKQRSSSRPSRSSQSDNRSSPQSSKYRRDEQKNIEWKAKKPSAPNIRMMTSRLGVS
ERVMHEQPCRILEKCGSCPILDFPYKNQLLQKTTDFKSRLQKASAIFSNTIVKDCVESEL
RLAYRHNVKMVVSEHAGLKNAKFSQIANEKRWIDLGMYRQSSNEVVDTGRCPIQTNIMND
ISAWLRTGIRVHNISVYTPQQKDGLLHCIILRSSHYTRQVLVTFVVTKPALQILRPLARD
ISEKFMNIQGVFMQVAPPNHSDDKQDPELKMIVGQDLLEEKYNDLFLNFSAASYMPVNSL
VANRIYNRIEELAELTGKETVLDLYCGAGGISLTLARSAKEVLSIDSSVHCIKDAIRNAK
RNEISNVGFYEGKVEEILPQLINEKRLQKADVVVVNPARQGCGPDVIEQIRKLEPKALFY
LSSFFDPMFNDLKCFVDDGYSLVFFEPYDTLPGTNNYEVLCYLVKK
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgaatgataactataagcagcgctcttcgtcacgtccctccagatcatctcaatctgat
aacagatcctctccccagagttctaaatacagaagagatgaacaaaaaaatatagagtgg
aaagcgaaaaaaccttcggcaccaaatattagaatgatgacaagccgtttgggtgtttct
gaaagagtaatgcatgaacagccctgccgcatccttgaaaaatgcggatcctgccccata
ctagattttccttataaaaatcaacttttacaaaagaccactgattttaaatccagatta
caaaaagccagtgctattttttccaacacaattgtgaaagattgcgtagaatctgaacta
cgcctcgcctatcggcataacgtaaaaatggttgtgtccgaacatgctggcttaaaaaac
gcaaaattttctcaaattgcaaatgaaaagcgctggatagatttaggaatgtatagacag
tcaagcaatgaagtggtcgatacaggccgctgccccattcaaacaaatatcatgaatgat
atatccgcttggctgcgcacaggaattcgagttcataatatttcagtctacactcctcaa
caaaaagacggacttttacattgcattattttacgttcttcacattatacaagacaagtc
cttgttacgtttgttgttactaaacccgccctacaaatattacgccctcttgctcgagat
atttctgagaaatttatgaatattcaaggtgtttttatgcaagtagctcctccaaatcat
tctgatgataaacaagatcctgaattaaaaatgattgtgggacaagatttacttgaagaa
aaatacaacgatttatttttaaatttttcagctgcaagctatatgcctgtaaattctttg
gttgccaatagaatttataatcgtatagaagaattggcggaactcactggcaaagaaaca
gtattggatttatactgtggagcaggtggcatttcattaacattagcacgttccgcaaaa
gaagtcttatccatagactcatctgttcactgcattaaggatgcaattcgtaatgcaaaa
cgcaacgaaataagtaatgttggtttttacgaaggcaaagtcgaagaaattcttccgcaa
cttatcaatgaaaaacgccttcaaaaagcagatgtggttgttgtaaatccggcacgccaa
ggatgcggccctgatgttattgaacaaataagaaaattagaacctaaagctttattttat
ttgtcatcattttttgatcccatgtttaatgacttaaaatgttttgttgatgatggatat
tctctcgtattttttgagccctatgacacattaccaggaacaaataattatgaggtttta
tgttatctggtaaaaaaataa
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