Silvanigrella aquatica: AXG55_12105
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Entry
AXG55_12105 CDS
T09772
Name
(GenBank) phenylalanine--tRNA ligase subunit beta
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
saqi
Silvanigrella aquatica
Pathway
saqi00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
saqi00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
AXG55_12105
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
saqi01007
]
AXG55_12105
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
saqi03016
]
AXG55_12105
Enzymes [BR:
saqi01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
AXG55_12105
Amino acid related enzymes [BR:
saqi01007
]
Aminoacyl-tRNA synthetase
Class II (U)
AXG55_12105
Transfer RNA biogenesis [BR:
saqi03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
AXG55_12105
Prokaryotic type
AXG55_12105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B3_4
tRNA_synthFbeta
FDX-ACB
tRNA_bind
B5
PhetRS_B1
Motif
Other DBs
NCBI-ProteinID:
APJ04607
UniProt:
A0A1L4D341
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All DBs
Position
2834454..2837291
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AA seq
945 aa
AA seq
DB search
MLASLNFVEKFISLPKLTKYTNINSKQIETKIFDLNKITPLLTKQGFEVDNIIIKGEGLE
TVVVGRIEKAEPHPNAAKLQICQVNAGESNLRQIICGAKNARPGLYVAVALPSTKLPNNL
EIKESKIREIESNGMLCSREELGLPINKDIDGDGIWEIEQDAQGGISTNILSQKLGYPLF
DILEISDVLLELSVTPNRPDMLCHEGVAREIMAGLTYSGVPFEKKENPGFAHKVTISEDV
IKKDALKNSSVNCAGVTFSAENHLQCPAFFVAIDSTQVTHSPAWLRNLLENLGQNSINNI
VDASNYILLAHGQPSHAYDLDKISSQNPNAKKLILRKAKQGEKFIGLDAKERELQEADEV
ICDIEGIQGLLGVLGGEQSKVSYETKKIVVEFANPHPVSVRRTSRRHARQTEASFMFEKG
IDEASRFKSALEFFALVTNLQEVKPKYCGTVHSIKENNKPEIKTEFRNLEIDFHSTAQEK
ILGAPIIEYTKQLNILESLGFILSNKTEKSTKVTIPSWRSSDIVGEADLVEEFIRIVGID
NVPSTPFISPAIVNYDDPHYKYLEKLSSRCASLGYNEVISLHFMRADDHEKLGLNSINAL
GEPVALMNPIIGDEPLMHTTLIPDLLRKVRKNLSYGTKSGQLFHSCRTFQNYDAHGERVF
KQNGESLGISALLAQNVENALEYHYSQGYAYSREKSQAGRPVETPRLAGVTFGNKMEKNW
QNSGEVNWTLHDIMSHIVELCHSVDLTITTVKICEEHHSTNDHSAKYHPLAKAFHPGRRV
GFYVVDDKNNSVSLGWAGELHPKTMRNYEIDVPCFAFELNVAVLLRSISRPKNLLNRSSA
VQKFPTVSRDFAFLLDENITAQKLNDVVANSLQNLIVKETPAILKTVQIFDIYKAKEMPV
NKRSIAFHISLIPTERTFTDKDIQKISNAVIEAVKNEFHAELRGN
NT seq
2838 nt
NT seq
+upstream
nt +downstream
nt
atgttagcaagtttaaattttgtggaaaaattcatatcacttcctaaattaacaaaatat
acaaatattaatagcaaacagattgaaacaaaaatatttgatttgaataaaataactccc
ttattaacgaaacaaggctttgaagtcgataacataataataaaaggagaaggtcttgaa
accgttgtcgtaggacggattgaaaaagcagagccccatcccaacgccgcaaagctacaa
atatgtcaagtgaatgccggcgaatctaacctcagacaaatcatttgtggcgcaaaaaat
gcgcgtcccggtttgtatgttgccgttgctttaccttctactaaattaccaaataatttg
gaaattaaagaatctaaaattagagaaattgaaagcaatggcatgctttgctcacgtgag
gaacttggcttacccataaataaagatattgatggtgacggaatttgggaaatagaacag
gatgcccaaggtggaatttcaactaatatattatctcaaaaactaggttatcctttattt
gatattttagaaatatccgatgtgttacttgagttgagcgtcactcccaatcgacccgat
atgctttgccatgaaggagtagcaagggaaattatggcgggacttacttattcaggcgtt
ccttttgagaaaaaagaaaatccgggatttgctcacaaagtgactatatctgaagatgtc
attaaaaaagatgctcttaaaaattcatctgtaaactgcgctggtgttactttttctgcg
gaaaatcatttgcaatgccccgccttttttgttgccatcgattccacacaagtgacccac
agtcctgcgtggcttagaaatttactagaaaacttaggtcaaaattcaattaataatatt
gtcgatgcgtcaaactatattttacttgctcatggacaacccagtcatgcttatgatctc
gataaaatttcatcacaaaatccaaatgctaaaaagcttattctgcgcaaagcaaaacaa
ggtgaaaaatttattggattagatgctaaagaaagagagctccaagaagcagatgaagtc
atttgtgacattgaaggaatacaaggacttttaggagtattgggtggcgagcaatcaaaa
gtttcttatgaaacaaagaaaatagtggtcgaatttgccaatccacaccccgtctccgtc
agacgcacctcacgcagacatgcaagacaaactgaagccagctttatgtttgaaaaagga
attgacgaagcatcacgctttaaatcagcacttgaattttttgcacttgtaacaaattta
caagaagtaaaaccaaaatactgtggaacagttcattctataaaagaaaataataaacca
gaaattaaaacagagtttcgtaatttagaaattgatttccactctacagcacaagaaaaa
atattaggcgcacctattattgaatacacaaagcaactcaatatattagagtcgctcgga
tttattctttcaaataaaacagaaaaatcaactaaagtaacaattccttcctggagatcc
tcagatattgttggagaagcagacttagttgaagaatttattcgtattgtaggaatcgat
aacgtaccatcgactccctttatttcacccgccattgtaaattacgatgatcctcattat
aaatatttagaaaaattaagttcacgttgtgcttcattaggttacaatgaagtcatcagt
ctccatttcatgagagcagatgaccatgaaaaactgggattaaattctataaatgcattg
ggagaacctgttgctttaatgaatcccattattggtgatgagccattgatgcacaccaca
ttaattcctgatttattaagaaaagttagaaaaaatttaagctatggcacaaaaagtgga
caattatttcactcctgcagaacattccaaaattatgatgcacatggagaacgagttttc
aaacaaaatggagaatccttaggaatttctgctttattagcgcaaaatgttgaaaatgct
ttagagtatcattattcccaaggctatgcttactcccgtgaaaaaagccaggcaggccga
cctgtggaaacaccacgccttgcgggtgtaacctttggcaataaaatggaaaaaaactgg
caaaactcgggggaagtaaattggactttacatgacattatgagccatatcgttgaatta
tgtcacagtgttgatctcacaatcacaacagtaaaaatctgtgaagagcatcattctaca
aatgatcattcagctaaatatcatcctttggcaaaagcattccatcctggcagacgagtt
ggcttttatgttgttgatgacaaaaataattctgtttctttaggatgggctggagaatta
catcctaagacaatgagaaattatgaaatagatgttccttgctttgcatttgaattgaat
gtggctgtactgttacgttccatttcacgacctaaaaatctattaaaccgttcttctgca
gttcaaaaatttcctactgtatctagagattttgcatttttattagatgagaatatcacg
gcgcaaaaattaaatgatgttgtcgcaaattcgttacaaaatctcattgtaaaagaaact
cctgcaatattaaaaacagtccaaatttttgatatttataaagcaaaagaaatgccagta
aataaaaggtctatcgcttttcatatttctttaattccaactgaaagaacctttacagat
aaagacattcaaaaaatatcgaatgcagttatagaagctgttaaaaatgaatttcatgcg
gaactcagaggaaattag
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