Silvanigrella aquatica: AXG55_14320
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Entry
AXG55_14320 CDS
T09772
Name
(GenBank) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
saqi
Silvanigrella aquatica
Pathway
saqi03420
Nucleotide excision repair
saqi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
saqi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AXG55_14320
03430 Mismatch repair
AXG55_14320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
saqi03400
]
AXG55_14320
Enzymes [BR:
saqi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AXG55_14320
DNA repair and recombination proteins [BR:
saqi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AXG55_14320
MMR (mismatch excision repair)
Other MMR factors
AXG55_14320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_11
AAA_30
PcrA_UvrD_tudor
DUF4085
AAA_12
FWWh
Sp-DndD
DEAD
DSPc
Motif
Other DBs
NCBI-ProteinID:
APJ05003
UniProt:
A0A1L4D462
LinkDB
All DBs
Position
3326257..3328602
Genome browser
AA seq
781 aa
AA seq
DB search
MHNEIETPDLSLLNKAQFDACTHNEGPAVVYAGAGSGKTRVICCRIAWLILNQGVPPSSI
LAVTFTNKAAKEMKERIEKYIGAQKAKNIIVSTFHAFCARFLRIYSHEAGYNPGFSIYDD
NDQKSLLKDILKQLNVPDKLLSVNTVKSKIDKIKNQGLTPEEYLQDIKNNQDYSLKEQKY
QLRQFGEHYDPELIQKVYAMYQRLMKQQNAMDFNDLLLVMFKLLENSPHVLESLQNRFRY
FLIDEFQDTNPIQFKLVSLLSSKTKNLFIVGDDDQSIYSWRGAEPSFILNFHKEHENTKV
YKLEENYRSSNTIISAATSVIKNNYKRADKSLYTKKTNGIKIKFKSCEDAFSESKYIANE
IYSAIQNEEKFSDFCILYRTNAQSRSLEDELRRRMMPYIIYGSVRFYERAEIKILLAYLK
LIINTTDEASFQKVINTPRRGFGDKALQNLKDLSIQRKETLLKTLNEVVFGGIENDITRS
ISGVKEFMMSYQKWRSNLDSHNKPSQILAEIISDIKFEAYLKTTHPEDFDERWLNVIELK
NAIVEFEHIQIDDEFNFENKIQTGIEKLSKFIEQAMLTVEPTVVNVQQGNANAITLMTIH
SAKGLEFPKVIIAGLEEGVLPHQNSLDSPEAIEEERRLMYVAITRAKEKLILTNCKRNRF
KDFLPAQESRFISEIPFEVIDYADNQNKNIKKEFGKINTIEQKFVDKPRIFKGDDLLKQE
MNSTQNDGVTWRKGQRVKHKVFGDGIIREIEKSSQGYRLKIKFEKSSIGEKTLIHTYVQP
A
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atgcataatgaaatagaaacccctgacctttcccttttaaataaagcacaatttgatgct
tgcacacacaatgaaggaccagcggtcgtttatgcaggagcgggaagcggaaaaacaaga
gtcatttgttgccgtattgcatggttgattttaaaccaaggagttcctccctcttctatt
cttgctgttacttttacaaataaagcagcaaaggaaatgaaagaaagaattgaaaaatat
attggtgcacaaaaggcaaaaaatattattgtttctacatttcatgctttttgtgcacgt
tttttaagaatctattcacatgaagcaggttataatcctggattttccatttatgatgac
aatgatcaaaaaagtcttttaaaagatattttaaaacaattaaatgttcccgataaatta
ttatctgttaataccgtaaaatcaaaaatagataaaataaaaaatcaaggtctcactccc
gaagagtatttacaagatataaaaaataatcaagattattcattaaaagaacaaaaatat
caacttcgccaatttggtgagcattacgatcccgaactcattcaaaaagtctatgcgatg
tatcaaagacttatgaaacaacaaaatgctatggattttaatgatcttctccttgtcatg
tttaaactacttgaaaactctcctcatgtattggaatctttacaaaatagattccgttat
tttttaattgacgaatttcaagataccaaccccatacaatttaaattagtaagtttatta
agttcaaaaactaaaaacttatttattgtgggcgatgatgatcaaagcatttattcatgg
cgtggcgctgaaccttcttttattttaaattttcataaagaacatgaaaatactaaagtc
tataaacttgaggaaaactatagaagttcaaataccattatatctgctgccacaagcgtt
ataaaaaacaattataaaagagcggataaatcattatatacaaaaaaaaccaatggaata
aaaattaagtttaaatcatgtgaagacgccttctcggaatcaaaatacattgcaaatgaa
atttattctgctattcaaaatgaggaaaaattctctgatttttgcattttatatcgtacc
aatgcgcaaagccgttctttagaagacgaactaagaagacgtatgatgccttatattatt
tatggatcagttcgattttatgaacgcgcagaaattaaaattttgttagcttacttaaaa
cttattattaatactactgatgaagcctctttccaaaaagtaatcaataccccaagaaga
ggctttggtgacaaagcattacaaaatttaaaagatttatcaattcagcgtaaagaaaca
cttttaaaaacattaaatgaagttgtttttggtggaattgaaaacgacatcacacgctcg
atttctggcgttaaagaatttatgatgagctatcaaaaatggcgtagtaatcttgatagt
cataataaaccatcgcaaattttagcagaaattatttcggatattaagtttgaagcttat
ttaaaaacaacacacccagaagactttgatgaacgttggttaaacgtgatcgaattaaaa
aatgctattgttgaattcgaacatattcagattgatgacgagtttaattttgaaaataaa
atccaaactgggattgaaaaactttcaaaatttattgaacaagctatgcttacggtagag
ccgactgttgtcaatgtacaacaaggtaacgcaaatgcaattacacttatgacaatacac
tctgcaaaaggtttagaattccctaaagttattattgctggccttgaagaaggcgtcctt
cctcaccaaaactcactcgactctcccgaagccattgaagaagaaagacgtctcatgtat
gtggctatcacccgagcaaaagagaaacttatccttacaaattgtaaaagaaatcgattt
aaagattttctccctgcccaagaaagtcgatttatttcggaaattccctttgaagttatt
gattatgcggataatcaaaacaaaaatattaaaaaagaatttggcaaaataaatacaata
gaacaaaaatttgtcgacaaacctcgcatttttaaaggggatgatcttctcaaacaagaa
atgaattcaactcaaaatgacggagtcacctggagaaaaggccaaagagtcaaacacaaa
gtgtttggagatggaatcataagagaaatagaaaaaagcagtcagggctacagacttaaa
attaaatttgaaaaaagtagcattggagaaaaaacattaattcatacctatgtgcagcca
gcataa
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