Sulfurimonas aquatica: GJV85_00875
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Entry
GJV85_00875 CDS
T08902
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
saqt
Sulfurimonas aquatica
Brite
KEGG Orthology (KO) [BR:
saqt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
saqt03032
]
GJV85_00875 (topA)
03400 DNA repair and recombination proteins [BR:
saqt03400
]
GJV85_00875 (topA)
Enzymes [BR:
saqt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
GJV85_00875 (topA)
DNA replication proteins [BR:
saqt03032
]
Prokaryotic type
DNA Topoisomerases
GJV85_00875 (topA)
DNA repair and recombination proteins [BR:
saqt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
GJV85_00875 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Lar_restr_allev
DUF7129
DUF6886
Motif
Other DBs
NCBI-ProteinID:
QSZ40730
UniProt:
A0A975GBN2
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Position
complement(184707..186938)
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AA seq
743 aa
AA seq
DB search
MDLIIVESPAKARTIKNFLGKGYEVIASKGHIRDLPKSRFGITIDEETNHLVPAYSVAKE
NAPTVKEIKALAKKADTIYIATDEDREGEAIGWHIAHAIKKDPEELPRIVFHEITKTAIK
HALESARKIDMDMVNAQQARRMLDRVVGYKLSPLLASKIQKGLSGGRVQSSTLKLVVERE
REIKAFIPVEFWTIDTAFKKDIDANLILHKGDKLSKMSIENKSQAEAITSSAKADSYKIT
KIETKQRKSSTPPPFMTSTLQQTASSKLGFTPKKTMMVAQALYEGVKTPDGTSGVITYMR
TDSLNLAQEAVGAVRGIIESRYGKKYLPAEPKVYTKKAKGAQEAHEAIRPTMLQFTPEVA
QSFLKADEIKLYRLIYERFMACQMEDAQFEQQSIIFTGKENEFRASGRKLIFDGFYAVTG
AEDKDKLLPTLKKGDSAEIQSIKPEQHFTEPPPRYSEASLIKKLEAEGVGRPSTYAPTVA
TLSTRTYVTIEKKQIIPTEMAFTVTDILEKHFANIVDISFTANMEEKLDEVSEGTVDWQK
LLSDFYFPFMDQVAAGKENIVSLKLAKPLGRTCPKCGESELLLRSGRFGNFIACSGFPKC
KYTEQCDEEGNTVEKKEETADEKCDKCGKEMVIKNGRNGQFLACSDYPDCKNTKSINVPE
QNSETPCPDCGGTISLKNSRRGPFWGCNNYPECKFISKFEPTTIKCKEKGCKGVLAPRTY
RNKEVYECVKCKARTPREEETKA
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
ttggatttaataatcgtcgagtcaccggctaaagctagaactataaaaaactttttaggc
aaaggttatgaagttatagcttctaaaggacatatccgtgatcttcctaaatcacgcttt
ggaattacaatagatgaagagacaaatcatcttgtacctgcttactccgtagcaaaagag
aacgctccaactgttaaagagataaaagctcttgcaaaaaaagctgatactatctatatc
gcgaccgatgaggaccgtgagggagaagctattggatggcatattgcacatgctatcaaa
aaagacccagaggaacttcctcgtattgtatttcacgagattacaaaaacagctattaag
catgccctagagtcagcgcgtaagatagacatggatatggtaaacgcacagcaagctcgt
cgtatgcttgaccgcgttgtgggttataagctctcaccacttcttgcgtcaaagattcaa
aaaggactctctggcggtcgtgtacagtcatctacgcttaagcttgtagttgaacgcgag
cgtgagataaaagcttttattccagtagaattttggactatagacacagcatttaaaaaa
gatatagatgcaaatctcatcttacataagggtgataaactctctaaaatgtctatagaa
aataagtctcaggcagaagcaattacttcaagcgctaaagctgacagttataaaatcact
aagatagaaactaagcagagaaagagctcaacaccaccaccatttatgacttcaacgttg
caacaaaccgcttcatcaaaacttggatttactcctaaaaagacaatgatggttgctcaa
gcactctatgaaggtgtaaaaacaccagatggaacttctggtgttatcacttacatgaga
acggattcacttaacttagctcaagaagccgttggcgcggttcgtggaattatcgagagt
agatatggtaaaaaatatcttcctgcagagcctaaagtctacacaaaaaaagcaaaagga
gcgcaagaagctcacgaggctatccgccctacaatgctacagtttacccctgaagttgca
caaagctttttaaaagcagatgagattaaactttaccgtctaatctatgagcgttttatg
gcttgtcagatggaagatgctcagtttgagcaacaaagtattatcttcactggtaaggag
aatgagttcagagcaagtggtagaaaactaatctttgatggtttttacgctgtaactgga
gcggaagacaaagataaacttcttccaactttaaaaaagggagatagtgctgagatacag
agtattaaacctgagcagcactttacagaaccacctccgcgttactcagaagcgtcttta
attaaaaaacttgaagctgagggcgttggtcgtccgtctacatatgctccaacagtcgct
acgctaagtactcgtacttatgtaactatagaaaaaaagcagattattccaacagagatg
gcatttacagttaccgatatacttgaaaaacactttgctaacatcgtagatatctctttt
acagcgaacatggaagaaaagctcgatgaagtaagtgaaggtactgtggactggcagaaa
cttttaagtgacttctactttccatttatggatcaagtagccgctggtaaagagaacatt
gtctctcttaaacttgctaagccacttgggagaacttgtcctaaatgtggagagtctgaa
ctacttctgcgttctgggcgttttggaaacttcatagcatgtagtggctttcctaaatgt
aaatacacggaacagtgcgatgaagagggaaataccgtagagaaaaaagaagagactgcg
gatgagaagtgtgataaatgtggtaaagagatggttattaaaaatggtcgtaatggtcag
tttctcgcatgtagcgactatcctgattgtaaaaatactaaaagcattaatgtcccagaa
caaaatagtgaaacgccatgtcccgactgtggtggaactatcagtcttaaaaactctcgt
cgtgggccattttggggatgtaacaactatcctgagtgtaaatttatctctaagtttgaa
ccaacgaccatcaaatgtaaagagaaaggctgtaagggtgttttagctcctcgtacttac
cgaaataaagaagtttacgagtgtgtaaagtgtaaagcacgcacgccaagagaagaagaa
acaaaagcataa
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