Sulfurimonas aquatica: GJV85_01695
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Entry
GJV85_01695 CDS
T08902
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
saqt
Sulfurimonas aquatica
Pathway
saqt03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
saqt00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
GJV85_01695 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
saqt03021
]
GJV85_01695 (rpoC)
03400 DNA repair and recombination proteins [BR:
saqt03400
]
GJV85_01695 (rpoC)
Enzymes [BR:
saqt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
GJV85_01695 (rpoC)
Transcription machinery [BR:
saqt03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
GJV85_01695 (rpoC)
DNA repair and recombination proteins [BR:
saqt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
GJV85_01695 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Peptidase_M23
RPOC_hybrid
Motif
Other DBs
NCBI-ProteinID:
QSZ40877
UniProt:
A0A975AYD3
LinkDB
All DBs
Position
343655..348175
Genome browser
AA seq
1506 aa
AA seq
DB search
MSKLVPVEVTEENRPKDIKQLQFRLASPEKVMSWSNGEVKKPETINYRTLKPERDGLFCA
KIFGPVRDYECLCGKYKKMRYKGVVCEKCGVEVTSTKVRRTRMGHIELVTPVAHIWYVSS
LPSRIGTLLGIKMKDLERVLYYEAYIVESGGESYYDAEAKTPVLQYDVLNEEQYRTLVQR
FGELGFKARMGGEVIRDLLDSIDLVDLFTNLKEAITQTKSEAKKKTINKRLKVIESFLNS
GNNPAWMMLTVLPVLPPDLRPLVSLDGGKFAVSDVNDLYRRVINRNQRLKRLVELEAPEI
IVRNEKRMLQESVDALFDNGRRANAVKGANKRPLKSLSEIIKGKQGRFRQNLLGKRVDFS
GRSVIVVGPSLAMDECGLPKKMALELFKPHLIAKLEDKGYATTVKAAKKMIEEKTNEVWE
CLAEIVDGYPIMLNRAPTLHKLSIQAFHPKLIDGKAIQLHPLVCAAFNADFDGDQMAVHV
PLSSAAIAECKVLMLASMNIMLPASGKAIATPSQDMVLGIYYVSLEKNNVKGSNKLFANV
DEIRIALEHDALDLHAKVRTRVDGRIIHTTAGRLLIKAILPDFVPSELWNRVMKKKYINE
VVDYVQKHGGIGITAGFLDKLKDLGFKHATESGVSISADDIRIPEMKAGKIAESKARVIE
IQKQFEAGLLTEQERYNKIIDVWTDTNNTLASEMMDLVQNDKDGFNSIHMMADSGARGSA
AQIRQLAGMRGLMAKPSGDIIETPIISNFKEGLNVIEYFISTHGARKGLADTALKTANAG
YLTRKLVDVAQNVKVVEHDCHTHEGIEISDISDQNTLIESLEDRLNGRVLADDVIDPISN
EILYAEGTLLDEVSAKVISEAGIKTAHIRTPTTCKSEAGICALCYGVNLATGHIVRTGEA
VGIVAAQSIGEPGTQLTLRTFHVGGTASSTAQERQVIATREGFIRYYNLKTYASKDGKNI
VANRRNAAILLVEPKIKAPFAGKVEIQTIHDEVLISVVGKKDTVRYVLRKNEIAKPNELA
GVSGQIEGKYYFPYETGSTVEEDESIVETIKDGWNVPSRIPYASELLVDNGAPVTQKILS
TEEGTVKYFLLKGDYLERFDGVKAGYEVVEKGLFATVVDANNREAVRHYIARGSVIVADD
NESVDATSMIAKPSSDESVVIAEWDPYSNPIISEANGVVSYEDIIAGTTATEQLDELTGK
TRLMVNDHISSEYKPTIVLATEDGELLRYAIEPKSSIFVSDGATVKVADIIAKTPKALQK
SSDITGGLPRVSELFEGRRPKATALISEIDGVVSFGKMLRGKVRVIVSNTENGIIKEYFV
DKSHEPVVSPGDFVHAGERLTTGILSSHELLRIMGVKALYNYLVSEVQQVYRSQGVNIAD
KHIEVIFTQMLRQIKIVKSGDTKFIEGDLISKAKFAAENEKIIRLGGRPAIAEPFLVGIT
RAAVSADSIISAASFQDTTKVLTEAAVSAKVDDLNNLKENVIIGRTIPVGTGIYKDQNVM
FAATED
NT seq
4521 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaattagtaccagtagaagtaaccgaagaaaatagaccaaaagatattaaacaa
ctacaattccgtttagcatcacctgaaaaggtaatgtcatggagtaatggtgaagtaaaa
aagcctgaaactattaactaccgtacactcaaacctgagcgtgatggacttttttgtgca
aaaatatttggacctgtaagagattacgagtgtctttgtggtaaatataaaaagatgcgt
tataaaggtgttgtatgtgaaaaatgtggtgttgaagtaacatctactaaagttcgtcgt
actcgtatgggtcacattgaacttgtaactcctgttgcacacatctggtatgtatcttct
ttaccatctcgtattggtactcttttaggtatcaagatgaaagaccttgagcgtgtactt
tattatgaagcttacatcgttgaatcaggtggagaatcttactatgacgcagaagcaaaa
actcctgttcttcagtatgacgttttaaacgaagaacagtacagaactctagttcagcgt
tttggtgagttaggatttaaagctcgtatgggtggagaggttattcgtgacttacttgac
tcaattgatttagtagatctatttacaaatcttaaagaagcaataacacaaacaaaatct
gaagctaaaaagaaaactattaacaaacgtcttaaagttattgagtcatttttaaatagt
ggaaataatcctgcatggatgatgttgactgtattgccagttcttccaccagatttacgt
ccacttgtatcacttgatggtggtaaatttgctgtttcagatgtaaatgacctgtatcgc
cgtgttattaaccgtaaccagcgtttgaagcgtttagttgaactagaagctccagagatt
attgtacgtaatgaaaaacgtatgttgcaagagtcagttgatgcactatttgataatggt
cgtcgtgcaaatgcagttaaaggtgctaacaaacgcccacttaaatcattaagtgaaatc
attaaaggtaagcaagggcgtttccgtcagaatcttcttggaaaacgtgttgacttttct
ggtcgttctgtaattgttgttgggccatctttagctatggatgagtgtggactacctaag
aaaatggctcttgagctatttaagccacacttgattgcaaaactagaagataaaggttat
gcgacaactgttaaagctgctaagaagatgatcgaagaaaaaactaatgaagtatgggag
tgtcttgcagagattgttgatggttatccaattatgcttaaccgtgcgccaactcttcat
aagctttcaattcaagcgtttcaccctaagctaattgatggtaaggctattcagcttcac
ccattagtttgtgctgcatttaatgccgatttcgatggggatcaaatggcagttcacgtt
cctttatcttctgcagctattgcagagtgtaaagtacttatgcttgcatctatgaatatt
atgcttcctgcatctggtaaggcaatcgctacaccatcacaggatatggtacttggtatt
tactatgtatcactagagaaaaataatgttaaaggttctaacaaactatttgcaaatgta
gatgagattagaattgcacttgaacatgatgctcttgacttacatgcaaaagtaagaaca
cgcgttgatggtcgtattattcatactactgctgggcgtttacttattaaagcaattctt
ccagattttgtaccttcagaactttggaatagagtaatgaagaaaaagtatatcaatgaa
gtagttgattacgttcaaaaacacggtggtattggtattactgcaggttttcttgataaa
cttaaagatttaggtttcaagcatgcaacagagtctggagtttctatctctgctgatgat
attcgtatacctgagatgaaagctggtaaaattgctgagtctaaagcaagagttattgag
attcaaaagcagtttgaagctggtcttttaactgaacaagaacgttacaataaaattatt
gatgtttggacagatacaaataatacacttgcttctgaaatgatggatcttgttcaaaat
gataaagatggatttaactctattcatatgatggctgactctggtgctcgtggttctgct
gcacagatccgtcaacttgccggtatgcgtggtctaatggctaaaccttcaggtgatatt
attgaaacgccaattatctcaaactttaaagagggacttaatgtaattgagtacttcatt
tcaactcacggtgctcgtaagggtcttgccgatacagcacttaaaacagcaaatgcgggt
taccttactcgtaaacttgttgatgttgcacaaaatgttaaagttgttgagcatgattgt
catacacacgaaggtattgagatttcagatatatctgatcaaaatacactaattgagtct
ttagaagatagacttaatggtcgtgttttagctgatgacgtgatcgatcctatctcaaat
gagattctgtacgctgagggtactcttcttgatgaagtaagtgctaaagttatatctgaa
gcaggtattaaaacagcacacattagaacgccaactacttgtaaaagtgaagctggaatc
tgtgcactttgttatggtgtgaatcttgcaactggtcatattgtaagaacaggtgaagct
gttggtattgttgctgctcagtcaattggtgagccaggtactcagcttacgctacgtact
ttccacgttggtggaactgcatcttcaactgctcaagagagacaagttatagcaactcgt
gaaggttttattcgttactataaccttaaaacttatgcatctaaagatgggaaaaatatc
gttgctaatagaagaaatgctgctattcttttagttgaacctaaaattaaagcgccattt
gcaggtaaagtagaaatacaaactattcacgatgaagtacttataagtgtagtaggtaaa
aaagatacagtacgttatgtactacgtaagaatgagattgctaagccaaatgaacttgcg
ggtgtaagtggacagattgaaggtaaatactacttcccatatgagactggaagtacagta
gaagaagatgaatcaattgttgagacaattaaagatggctggaatgttccatcacgtatc
ccttatgcatctgaactgttagttgataatggagctcctgtaacacagaagattctttct
actgaagagggtactgttaagtatttcttacttaaaggtgattaccttgagagatttgat
ggcgttaaagctggatatgaagtagttgaaaaaggtctttttgcaactgtagtagatgca
aataaccgtgaagctgtacgtcactatatcgctcgtggatctgtaatagttgcagatgat
aatgaaagtgttgatgctacaagtatgatagctaaaccttcatctgatgagtctgttgtt
attgctgagtgggatccatactctaaccctattatttctgaagcaaatggtgttgttagt
tatgaagatattatagctggtacaacagcaacagagcagttagatgaacttactggtaaa
actcgtcttatggttaatgatcatatttcatctgagtacaagccaacaatcgttcttgca
acagaagatggtgaactacttcgttatgcaattgagcctaagtcatctatatttgttagt
gatggtgcaactgttaaagtggcagatattattgctaaaacaccaaaagcacttcaaaaa
tcatcagatattactgggggtcttcctcgtgtatctgaactttttgaaggtcgtcgtcca
aaagcaacggcacttatctctgagatagatggtgttgtaagttttggtaaaatgcttcgt
ggtaaagtaagagtaatagtaagtaacactgaaaatggaattatcaaagagtactttgtt
gataaatcacatgagccagttgttagcccgggagattttgtacatgcaggtgagcgttta
actacaggtattttatcttcacatgagttacttcgtattatgggtgttaaagcactttat
aactacctagtatctgaagttcaacaagtttaccgttctcaaggtgttaatattgctgat
aagcatattgaagttatctttactcaaatgttacgtcagatcaaaattgttaagtctgga
gatactaagtttatagagggagatttaatctctaaagcaaaatttgctgctgagaatgaa
aaaatcattcgtcttggtggtcgtcctgcgattgctgagcctttccttgttggtatcaca
agagctgctgtatctgctgatagtattatctcagctgcatctttccaagatacaactaaa
gttctaacagaagctgcagtatcagctaaagttgatgatcttaacaacttaaaagagaat
gtaattatcggtcgtactattccagtaggaacaggtatttataaagatcaaaatgttatg
ttcgctgctactgaagattag
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integrated database retrieval system
