Sulfurimonas aquatica: GJV85_01980
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Entry
GJV85_01980 CDS
T08902
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
saqt
Sulfurimonas aquatica
Pathway
saqt00521
Streptomycin biosynthesis
saqt00523
Polyketide sugar unit biosynthesis
saqt00525
Acarbose and validamycin biosynthesis
saqt00541
Biosynthesis of various nucleotide sugars
saqt01100
Metabolic pathways
saqt01110
Biosynthesis of secondary metabolites
saqt01250
Biosynthesis of nucleotide sugars
Module
saqt_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
saqt00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
GJV85_01980 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
GJV85_01980 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
GJV85_01980 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
GJV85_01980 (rfbB)
00525 Acarbose and validamycin biosynthesis
GJV85_01980 (rfbB)
Enzymes [BR:
saqt01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
GJV85_01980 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
Polysacc_synt_2
NAD_binding_4
RmlD_sub_bind
FCH
Motif
Other DBs
NCBI-ProteinID:
QSZ40930
UniProt:
A0A975AYP2
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All DBs
Position
complement(414346..415413)
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AA seq
355 aa
AA seq
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MQQKNILVTGCAGFIGSNFVPYFLEKYPEYNVINLDLLTYAGDLANLSECENNPKYKFIK
GDICNRELVEFIFNEYDINGVIHFAAESHVDNSIKNPGVFIETNVNGTFTLLDVAQKYWM
DKPFNYKENYKGCRFHHISTDEVYGTLNETDLFTEETPYAPNSPYSASKASSDMIVRSYQ
ETYGMNTVITNCSNNYGPKQHNEKLIPTIIRKALSGEAIPIYGDGKNIRDWLYVLDHCKG
IDLVYHTGKEANVYNIGGRNERTNLQIVDSICTILDEKVPLSLSPVIASEAKQSISSYKE
LITFVEDRAGHDRRYAIDATKLETQLGWKADEDFDSGIVKTVDWYMDKYSIGINN
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgcaacagaaaaacatcttagtaacaggctgtgcaggtttcataggaagcaacttcgta
ccctactttttagagaagtatccagagtataatgtaatcaatctagacctattaacatat
gcaggtgacttagctaacctaagtgagtgtgagaacaaccctaagtataaattcatcaaa
ggcgatatttgtaatcgtgaactagtagagtttatatttaacgagtatgacattaatggc
gttattcactttgctgctgaatctcatgttgacaactctattaaaaacccaggtgtgttc
atagagacaaatgtaaacggcactttcactctacttgatgttgctcagaaatactggatg
gataaaccattcaattacaaagagaactacaaaggatgtaggtttcaccacatctcaaca
gatgaagtatacggaactctaaacgaaactgacctctttactgaagagacgccatatgca
cctaactctccatactcagcttctaaagcatctagcgatatgatagtaaggtcttaccaa
gagacatacggaatgaatacagttataactaactgttcaaataactatggtcctaaacaa
cataatgaaaaactaataccaactattatccgcaaagcacttagcggtgaagctattcct
atctatggtgatggtaagaacataagagattggttatacgtacttgatcactgtaaaggt
atagatttagtttaccatacaggcaaagaagctaatgtatataatattggtggaagaaac
gagagaactaatcttcagatagtagactctatatgtactatcctagatgaaaaagttcca
ctctcgttatcccccgtcattgcgagcgaagcaaagcaatccatttcttcatacaaagag
ctcataactttcgtagaagacagagcaggacatgatagacgttatgctatagatgcaaca
aaactagaaacacaacttggctggaaggctgatgaagattttgactctgggatagttaag
actgttgattggtatatggataaatattctataggcataaacaattga
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