Sulfurimonas aquatica: GJV85_03150
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Entry
GJV85_03150 CDS
T08902
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
saqt
Sulfurimonas aquatica
Pathway
saqt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
saqt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GJV85_03150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
saqt03021
]
GJV85_03150
03019 Messenger RNA biogenesis [BR:
saqt03019
]
GJV85_03150
Transcription machinery [BR:
saqt03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
GJV85_03150
Messenger RNA biogenesis [BR:
saqt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
GJV85_03150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
Spore_III_AA
AAA
ATPase_2
OB_RNB
OB_RNR_1st
S1CSD-TOTE-2
Motif
Other DBs
NCBI-ProteinID:
QSZ41149
UniProt:
A0A975AYY1
LinkDB
All DBs
Position
complement(666715..668079)
Genome browser
AA seq
454 aa
AA seq
DB search
MSDNNSQQPRNNSKPTNPKSNNKNNSKSRTHTPVKGSSVEDLRTKSIEELINIAEELNVE
HPQELKRQDVIFEILKAQTEQGGFILFSGILEIMQDGYGFIRSIDKSFNESINDAYVSNT
QIKRFALRNGDVVTGQVRPPKDQERYYALIKIEAVNGLPPEESKKRPLFENLTPLYPEER
IKLEYREKGLTGRMLDLFSPIGKGQRGLIVAPPRSGKTELLKEIAHGISANHAEIDLLVL
LVDERPEEVTDMERSVKGEVYSSTFDMPAKNHVKVAEMVIEKAKRRVEMGRDVVILLDSI
TRLARAYNTVTPSSGKVLSGGVDANALHKPKRFFGAARNIENGGSLTIIATALVDTGSRM
DEVIFEEFKGTGNMEVVLDRKIADRRIFPAIDILKSGTRKDELLIGKLDLQKVFILRQMI
HKQDNEVEALKFVYNTMRKKPTNEEFLESMNTDK
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgagtgataacaattcacaacaacctcgtaacaactctaaacctacaaatccaaaatca
aacaataaaaacaactcaaaatctagaacacatactccggttaaaggatcaagtgtagaa
gacttacgtactaaaagtattgaagagcttattaacatagctgaagagttaaatgtagag
catccacaagagcttaaacgccaagacgttatctttgaaattcttaaggctcaaactgag
caaggtggttttatcctctttagtggaatccttgagattatgcaagatggttatggtttt
atccgctcgattgacaaaagttttaacgagtctatcaatgacgcttatgtttcaaatact
caaatcaaacgctttgcacttagaaatggtgacgttgtaactggtcaggtacgccctcca
aaagatcaagaacgctactatgcacttataaagatagaagcggttaatggtcttcctcca
gaagagtctaaaaaacgtccactttttgaaaaccttactcctctttatccagaagagaga
attaaactagagtatagagaaaaaggtttaactggccgtatgcttgatcttttctctcct
attggtaaaggacaacgtggtcttattgttgcacctcctcgttcaggtaaaactgagctt
cttaaagagatagcacatggtatttctgcaaaccatgctgaaattgacctactagtttta
cttgttgatgagagaccagaagaggttacagatatggaacgtagcgttaagggtgaagtt
tactcttctacttttgatatgccagcgaaaaaccatgttaaagttgctgagatggttata
gaaaaagcaaaacgtcgcgttgaaatgggtcgtgacgtagttatacttcttgactctatc
actcgtcttgcgcgtgcttataacacggtaacgccatcaagtggtaaagtactctcaggt
ggcgttgacgcgaatgctcttcacaaaccaaaacgcttctttggagctgctcgtaacatc
gaaaatggcggaagtttaactattatagcaactgcgcttgttgatactggtagccgtatg
gatgaagttatctttgaagagttcaaaggtactggtaatatggaagttgttcttgataga
aaaattgcagatagaagaatatttcccgctattgacattcttaaatctggtactcgtaaa
gatgagttacttattggtaagcttgatttacaaaaagtatttatacttcgtcagatgatt
cataaacaagacaatgaagtcgaagcgcttaaatttgtttataacactatgcgtaaaaaa
cctacgaacgaagagttcctagagagtatgaacacagataaatag
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