Sulfurimonas aquatica: GJV85_07630
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Entry
GJV85_07630 CDS
T08902
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
saqt
Sulfurimonas aquatica
Pathway
saqt03030
DNA replication
saqt03430
Mismatch repair
saqt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
saqt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GJV85_07630 (dnaE)
03430 Mismatch repair
GJV85_07630 (dnaE)
03440 Homologous recombination
GJV85_07630 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
saqt03032
]
GJV85_07630 (dnaE)
03400 DNA repair and recombination proteins [BR:
saqt03400
]
GJV85_07630 (dnaE)
Enzymes [BR:
saqt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GJV85_07630 (dnaE)
DNA replication proteins [BR:
saqt03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GJV85_07630 (dnaE)
DNA repair and recombination proteins [BR:
saqt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GJV85_07630 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
HHH_3
Motif
Other DBs
NCBI-ProteinID:
QSZ41983
UniProt:
A0A975B0N8
LinkDB
All DBs
Position
complement(1592650..1596261)
Genome browser
AA seq
1203 aa
AA seq
DB search
MSAQPFTHLHLHTEYSLLDGANKLTNLVTRVKELGMTSVAMTDHGNMFGAIDFYQQMSAA
GIKPIIGMEGYIHNGDTLGDKSTKQRFHICLYAKNKKGYENLMYLSSKAFIEGFYYFPRI
NKKELREHSEGLICTSACLQGEVNWHLNLQNERNVKNGALGYDGALAVAREYQDIFGDDF
YLELMRHGIGDQLFIDDQILKISRETGIKVVATNDTHYTFPNDAQYHEAFMCIGMNKLYD
DPNRMRHSVHEFYLKSPEQMARIFADIPEAIEHTQEIVNKVEDFALTVKEPIPPNFKFTP
EYAAKDGLIIDHADDAPLPADATEKDKKTWFSAIDKNDAEYFTFCCKRGLENRLKIVPQE
RHQEYRERLEFEMDIINSMKFPGYMLIVWDFVKVAKEMGIAVGPGRGSAAGSLVAFSLDI
TDIDPMKYDLLFERFLNPERVSMPDIDMDFMQARRGEVIDYVVEKYGRNQVAQIITFGSL
LAKGVIRDVARVLDMPLSQADKMAKLIPDELGITLNGKEKKGEFIDGAFQKEPKIQELIS
EDANAKRVWEFAKKLEGLKRNSGIHAAGVVISNEELWYKTPIYKPSGETTFVTQYSLNYL
EDVDLIKFDFLGLKTLDVIDNAIKLIKRRYDKDVVWHEIDENDPRVYEVIRTGETVGMFQ
IESSGMQDLNRRLKPDNFEDLIAVLALYRPGPMESGMLDSFIERKHGREAIEYTFDVMKP
ILENTYGVIVYQEQVMQIVQHVGGFSLGYSDIIRRAMGKKKDMATYNAEFSEGAAKQGHP
YQEASKLFDLIEKFAGYGFNKSHSAAYAMVTFQTAWLKTYYPNEFMAALLTSDKDNTEKV
VRYIDEVKRMGIELSPPDVNDSYLEFSATTKEDRDIILFGLGAIKGVGKSAVISIIETRE
EDGEFTSIENFVNRIDPSKVNKRFVESSIKSGGFDRFGYSRKALLDQIDLIVETAKKASD
ARKNAVGSLFGDDEEITNVKLVLKNSDEYELKEILEFEKDTLGFYVSGHPMDNFRSEMDE
LNYTMSSELESVKDGSQAIFIGKVEGVVTKISKKGHQFGIIDLMDFHGNMEIMLFSDKLE
KLSQMDKEEPIAFKGRITHTDFGPRINVSKIMTLKEAKKETKKVKKEVQEKPPEPISLSV
RLDSDIEVLEKLYALIRQNPGNRPLSITIISKLHNVVLDSAIRVDSKIIAALDGNESVDI
IGM
NT seq
3612 nt
NT seq
+upstream
nt +downstream
nt
ttgagtgcacaacccttcacccatttacatcttcataccgaatattcactcctcgatgga
gccaacaaactaactaaccttgttacaagagttaaagagcttggaatgacttctgtcgct
atgactgaccatggaaatatgttcggcgccatagacttttatcagcagatgagtgctgct
ggaattaagcctattatagggatggaaggatatattcataatggtgacaccttaggcgat
aagagcacaaaacagcgttttcatatctgtttgtatgctaaaaataagaagggctacgag
aaccttatgtatctctcttctaaagcgtttatcgagggattttactacttcccacgtatc
aataaaaaagagcttcgagaacatagtgaaggacttatctgtacctctgcttgtcttcaa
ggggaagtgaactggcacttaaatcttcaaaatgagcgaaacgtcaaaaatggcgccttg
ggttatgatggagcgcttgcagtggcgcgagagtatcaagatatatttggagatgatttt
tatcttgaactgatgcgtcatggaataggggatcaactttttatagatgatcagattttg
aaaatatcacgcgagactggcataaaagttgtcgcaacaaatgacactcactataccttt
ccaaacgacgcgcagtatcatgaggcgtttatgtgtattgggatgaataaactctatgac
gatccaaatcgcatgcgtcactccgtacatgagttttatctcaagtctccagagcagatg
gctagaatcttcgctgatattcctgaggcgatagaacatactcaagagattgtaaataaa
gtagaagattttgcccttacggtaaaagagccaattccgcctaactttaaatttactcca
gaatatgccgcaaaagatggtttaataatagaccatgccgatgacgctcctctgccagcg
gacgcaactgaaaaagataaaaaaacatggttttccgctatagataaaaatgatgcggag
tactttacgttttgctgtaaacgcggacttgaaaaccgtcttaaaatagttccccaagag
cgccatcaggagtatcgtgagcgtttagagtttgagatggatatcatcaactctatgaag
ttccctggctatatgcttatcgtttgggattttgttaaggtcgcaaaagagatgggcata
gctgttgggccgggacgtggctccgcagctggtagtcttgttgctttttcactcgatatc
accgatattgacccgatgaagtatgatctgctctttgagcgttttttaaatcctgaacgt
gtaagtatgcccgatatcgatatggactttatgcaagctcgtcgtggggaagttatagac
tatgttgttgaaaaatatggccgtaatcaagttgctcaaatcataacctttggatcactc
ctagctaagggagttatccgtgatgttgctcgcgttttagacatgccgctctctcaagca
gataagatggcaaagcttattcctgatgaactgggaatcactttaaatggcaaagagaaa
aaaggtgagtttattgatggagcttttcaaaaagagccaaagatacaagagttaataagt
gaagacgcaaacgctaaaagggtttgggagtttgcaaaaaaactagaaggtcttaaacgc
aactctggtattcatgccgctggcgttgtaatatccaatgaagagctatggtataaaacg
ccaatctataaaccatcgggtgagacgacttttgtaacgcagtactccctaaactatctc
gaagatgttgatcttatcaagtttgacttcctagggctgaagactcttgacgtaatcgat
aacgccataaagcttatcaaacgccgttacgacaaagacgtggtatggcatgagatagat
gagaacgaccctcgcgtttatgaggttatacgtaccggtgagactgttggaatgtttcag
atagagtcctcgggtatgcaagatctaaatcgtcgtcttaaaccagataattttgaggac
ttgattgcggtcttggcactctatagaccaggaccgatggagtctggaatgcttgatagt
ttcatcgaacgtaagcatggtcgtgaagctattgaatacacgtttgacgtaatgaagcca
atccttgaaaatacctatggagtcatcgtttaccaagagcaagttatgcagattgttcag
cacgttggcggtttctctcttggttactcagacattattcgtcgtgccatgggtaagaaa
aaagatatggcaacttataatgcggagtttagtgagggtgcagcgaagcagggacatcct
tatcaagaggcaagtaaattatttgacttgattgaaaagtttgcagggtatggttttaat
aaatctcactcagcggcttacgcaatggttacgtttcaaacggcatggctcaagacttac
tatccaaatgagtttatggcggcgcttttaacgtcagataaagacaacaccgaaaaagtc
gtgcgttacatagatgaagttaaaagaatgggaatagagctctcaccacctgacgttaac
gactcatacctagagttctcagcaactactaaagaagatagagacatcattctatttggt
ttgggtgctattaaaggcgttggaaaatcagctgttatttctattatagaaacgcgagaa
gaggatggtgagtttacatcgatagagaactttgtaaatagaatagacccttcaaaagta
aataaacgcttcgtagagtcaagtataaagtcaggtggatttgatagatttggctactct
agaaaagccttgcttgatcagattgaccttatagtagagactgctaaaaaagcatctgac
gcaagaaaaaacgctgttggatctttatttggagacgatgaagagattacaaacgttaaa
ctagttcttaaaaactcggatgagtatgaacttaaagagattttggaatttgaaaaagat
accttaggtttttacgtttcaggtcaccctatggataattttcgctcagaaatggatgag
ttgaactacacaatgagttcagagttagagagcgttaaagatggctctcaagctattttt
ataggaaaagttgaaggtgtcgttactaaaatctctaaaaaaggacatcagtttggaata
atagacttgatggacttccatggaaatatggaaattatgcttttctcagataaactagaa
aaactatcacagatggataaagaggaacctatcgcgtttaaaggtaggataactcatacg
gactttggtccaagaattaacgtgagtaagattatgacgcttaaagaggcgaaaaaagag
acaaaaaaagttaaaaaagaggtacaagaaaaaccacctgaaccaattagtctctctgtg
cgtttagactctgatatagaagttttagaaaaactctatgctcttatcagacaaaatcca
ggtaatcgacctcttagcattaccattatctcaaaactacataacgtagtgcttgattct
gccattagagtagatagtaaaattattgcagcgcttgatggaaatgagtctgtagatatt
ataggaatgtaa
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